Gene Noca_2687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2687 
Symbol 
ID4598338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand+ 
Start bp2855857 
End bp2856528 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content77% 
IMG OID639777293 
ProductYhhN family protein 
Protein accessionYP_923877 
Protein GI119716912 
COG category[S] Function unknown 
COG ID[COG3714] Predicted membrane protein 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0177327 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCAGG CGGATGGCCG AGCCCCTCGG CGAGTCACCG GCGCTGCGTT CGGCCTGCTC 
GCCCTCACCG ACGCGGCCCT CGCCGCCGCA CCACCGCGGC TCGGGCGACT CCGGCTGCTG 
ACCAAGCCGC TGCTGATGCC GGCGCTGCTG AGCCGGTCGC TGCCGGTGCC CGGCGACCGC 
AGGCTGGCCG CGGCCCAGGG GTTCTCCTGG GGCGGCGACC TCGCCCTGAT CGGCAAGAGC 
CGGACGTCGT TCCTGGCCGG CGTCGGCCTG TTCCTGGCCG CCCACCTCTG CTACCTCGGC 
GCCTTCCGCG CCCGCTCCTC GGTCCCGGTG CTCGCGACGC CGGGGCGACG CCGGTTCCTG 
GCGCTGGCGG GCGCGAGTGC CGGTGGCATG GCGCTCGCCG CGGCCCGCGA GGACCGGGTC 
CTCGCGCTGC CGGTGGCCAC CTACAGCGGC GCCCTGGCCG CCATGGTCGC CACGGCCGCG 
GCGATCGACC CGGACCGCGG CCGCGACCAG GTCCTGGGTG GCGCGGCACT GTTCCTCGCC 
TCGGACACCG TGCTCGGCCT CCGCACGTTC CTGCTCGGCG AGGAGAGCGC CGCGTCCCGG 
GCCCTCGAGT CGGTCGTGAT GGCGACCTAC ACCGCCGGGC AGTGGTGCAT CGGCGAGGGG 
ATGCGTCGGT AG
 
Protein sequence
MTQADGRAPR RVTGAAFGLL ALTDAALAAA PPRLGRLRLL TKPLLMPALL SRSLPVPGDR 
RLAAAQGFSW GGDLALIGKS RTSFLAGVGL FLAAHLCYLG AFRARSSVPV LATPGRRRFL 
ALAGASAGGM ALAAAREDRV LALPVATYSG ALAAMVATAA AIDPDRGRDQ VLGGAALFLA 
SDTVLGLRTF LLGEESAASR ALESVVMATY TAGQWCIGEG MRR