| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2490 |
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| Symbol | |
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| ID | 4597115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 2658294 |
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| End bp | 2660891 |
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| Gene Length | 2598 bp |
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| Protein Length | 865 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639777095 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_923681 |
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| Protein GI | 119716716 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4581] Superfamily II RNA helicase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.33618 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCGACC TGCTCGACGA AATCACCGCC GCGGCCACCG CGCGCGGGCT GACCCTCTAC
CCGCACCAGG AGGAGGCGAT CCTTGCCGTG CTGGCCGGCG ACAACGTCGT GCTGGCCACG
CCCACCGGGT CGGGCAAGTC GTTGGTCGCC GAGGCCGCGC ATCGGATCGC CCTGGAGGGT
GGCCCGGAAT GGGGGTCTGG GGGCGAAGCC CCCAGTGGGG CTTCCCGGGG GAAATGGGGG
TCTGGGGGCG AAGCCCCCAG TGGGAGCCCC CGGGTGTCGT TCTACACGGC GCCCATCAAG
GCACTGGTGA GCGAGAAGTT CTTCGCGCTC GTCGAGGAGT TCGGGGCCGA GGACGTCGGC
ATGCTCACCG GCGACGCGTC GGTCAACCCC GACGCGCCGA TCATCTGCTG CACCGCCGAG
GTGCTCGCGA ACATCGCGCT GCGCGAGGGC TCCCGCGCCG ACGTCCGGCT GGTCGTGATG
GACGAGTTCC ACTTCTACGC CGAGCCGGAC CGCGGCTGGG CCTGGCAGGT GCCGCTGCTG
GAGCTCCCGC AGGCCCAGTT CCTGCTGATG TCGGCCACCT TGGGGGACAT GTCCGAGCTC
GCCGCCGACC TGACCCGGCG CAACGGACGC GAGACCACCG TGGTGGCCGA CGCCGTACGC
CCGGTCCCGC TGAGCTTCAG CTGGGTGATG ACACCGCTCG CGGAGACCCT CGAGGAGCTC
GTGACCACCG GGCAGGGTCC GGTGTACGTC GTGCACTTCA CCCAGAAGGA CGCGGTCGAG
CAGGCCACCG GGCTGCTCGG TGCGAGCTGG CTGCCCAAGC CCGACCTCGG GGACCGGCTG
GCGGCGAACC GCTTCGGGGC CGGATTCGGC AAGACCCTGT CCAAGCTGCT GCGGCGCGGC
ATCGGGGTGC ACCATGCCGG GATGCTCCCG CGGTACCGAC GCCTGGTCGA GCAGCTGGCC
CAGGAGGGCC GGCTGAGCGT CATCTGCGGC ACCGACACCC TGGGCGTGGG CATCAACGTG
CCGATCCGGA CCGTGCTGTT CACCGGCCTC GCGAAGTTCG ACGGCAGCCG GCAGCGGATC
CTGCGGACCC GGGAGTTCCT CCAGATCGCG GGCCGGGCCG GCCGGGCCGG CTTCGACACC
GCCGGGTTCG TGGTGGTCCA GGCACCGCAG CACGTCATCG AGAACGAGCT GGCGAAGGCG
AAGGTCGCCG CTCGGCAGGC GGCCGGGAAG AAGAAGTCCA AGGCGCAGCT GCGCAAGCCG
CCCGAGGGGA CGGTCGTGTG GAGCGAGCAG ACCTTCGACA AGCTCGTCGC GGGCCAGCCG
GAGCCGCTGA CCTCGCGGAT GAAGGTCGAC AACGCGATGC TCGTCAACGT CCTGGCCCGC
GAGGAGGACG CCTTCCCGGT GCTGCGCCGC CTGCTCCTCG ACAACCACGA GGACCGGCGC
CAACAGCTCC GGCTGGCCCG GCGGGCGCTG CGGCTGGCGC GCGCCCTGCT GCGCTCCGGG
GTGCTCACCC GGCTCGACAC ACCGGACGAC CGGGGCCGCC GCTACGTGCT GACCGTCGAC
CTGCCTCCCG ACTTCGCGCT CAACCAGCCG CTGGCGCTCT TCGCGCTCGC GGCACTCGAC
GTGCTCGACC CGGAGTCGGA GACCTACACC CTGGACCTCG TCTCGGTGGT CGAGGCGGTC
CTCGAGGGCC CGCGGCAGGT CCTGCTCCAG CAGCAGCACG TCGCCCGCGG CGAGGCGATC
GCGGAGATGA AGGCCGACGG CCTCGAGTAC GACGAGCGGA TGGCGCTCCT CGAGGAGGTC
ACCTGGCCAC AGCCGCTCGC GGAGCTGCTC GAGGCGACCT ACGAGATCTA CCGGGAGCGG
CATCCGTGGC TCCGCGAGGA CGCGCTCCAG CCGAAGTCGA TCGTGCGGGA GATGTACGAG
CAGGGGATGA GCTTCACCGA CTTCGTCGGC CGCTACCAGC TGGCCCGGTC CGAGGGGCTG
GTGCTGCGCT ACCTGACCGA CGCCTACCGC ACCCTGCGCC AGACCGTCCC GGACCAGCAC
CGGACGCCCG AGCTCGAGGA CCTGGTCGAG TGGCTGGGGG AGACCGTGCG GCAGACGGAC
TCCTCGCTGC TCGACGAGTG GGAGGCCCTC GCCGACCCCG ATCATGCGCG CAGGGACGTC
AGCCACCACG AGCCACCGCC GTCGCCGCGG CCGATCTCCC AGCAGGACCG GGCCTTCCGG
GTCATGGTCC GCAACGCGAT GTTCCGGCGG GTCGAGCTGG TCGCCCGCGA CGACCTCGAC
GGGCTGATGG CGCTCGAGCG GGCCGCCGCC GACCGCACCG ACCCGCCGGC CGAGATCCGC
ATGCCTCGGT CGGCCTGGGA CGCCGCGATC GAGGACTACT TCGCCGAGCA CGACCGGGTG
CGGCTGGACG CGGACGCACG GGGTCCGTCG CTGCTGAGGA TCGCGCCGTC GGCACGGACC
TGGGAGGTCG TCCAGACGAT CCACGACCCC GCCGGCCACC ACGACTGGGT GATCGAGGCC
GAGGCCGACC TGGACGCCTC CGACGAGGCC GGCGAGCTGG TGCTGCGCAC GGTGGCGATG
CGACGCCTGG GCGATTGA
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| Protein sequence | MADLLDEITA AATARGLTLY PHQEEAILAV LAGDNVVLAT PTGSGKSLVA EAAHRIALEG
GPEWGSGGEA PSGASRGKWG SGGEAPSGSP RVSFYTAPIK ALVSEKFFAL VEEFGAEDVG
MLTGDASVNP DAPIICCTAE VLANIALREG SRADVRLVVM DEFHFYAEPD RGWAWQVPLL
ELPQAQFLLM SATLGDMSEL AADLTRRNGR ETTVVADAVR PVPLSFSWVM TPLAETLEEL
VTTGQGPVYV VHFTQKDAVE QATGLLGASW LPKPDLGDRL AANRFGAGFG KTLSKLLRRG
IGVHHAGMLP RYRRLVEQLA QEGRLSVICG TDTLGVGINV PIRTVLFTGL AKFDGSRQRI
LRTREFLQIA GRAGRAGFDT AGFVVVQAPQ HVIENELAKA KVAARQAAGK KKSKAQLRKP
PEGTVVWSEQ TFDKLVAGQP EPLTSRMKVD NAMLVNVLAR EEDAFPVLRR LLLDNHEDRR
QQLRLARRAL RLARALLRSG VLTRLDTPDD RGRRYVLTVD LPPDFALNQP LALFALAALD
VLDPESETYT LDLVSVVEAV LEGPRQVLLQ QQHVARGEAI AEMKADGLEY DERMALLEEV
TWPQPLAELL EATYEIYRER HPWLREDALQ PKSIVREMYE QGMSFTDFVG RYQLARSEGL
VLRYLTDAYR TLRQTVPDQH RTPELEDLVE WLGETVRQTD SSLLDEWEAL ADPDHARRDV
SHHEPPPSPR PISQQDRAFR VMVRNAMFRR VELVARDDLD GLMALERAAA DRTDPPAEIR
MPRSAWDAAI EDYFAEHDRV RLDADARGPS LLRIAPSART WEVVQTIHDP AGHHDWVIEA
EADLDASDEA GELVLRTVAM RRLGD
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