| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2351 |
|---|
| Symbol | |
|---|
| ID | 4595966 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 2503374 |
|---|
| End bp | 2505095 |
|---|
| Gene Length | 1722 bp |
|---|
| Protein Length | 573 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639776950 |
|---|
| Product | ferredoxin--nitrite reductase |
|---|
| Protein accession | YP_923543 |
|---|
| Protein GI | 119716578 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0155] Sulfite reductase, beta subunit (hemoprotein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGACC TGCGCTACAC CGTCCAGCCC GCCAGCAGCA CCGAGATCCC GCGTCCCAAG
CGGGCCGAGG GCCAGTGGGC CCTCGGCCTC CGCGAGCCGC TCAACGCCAA CGAGCAGCAG
AAGAAGGACG ACAGTCCGCT CAACGTGCGC GACCGGATCG TGAACGTCTA CAGCAAGCGC
GGGTTCGACT CCATCGACCC CGCCGACCTG CGCGGCCGGT TCCGCTGGTA CGGCATCTAC
ACCCAGCGTC GCCCCGGGCT CGACGGCGGC AAGACCGGAG CCCTCGAGCC GCACGAGCTC
GACGACCGCT ACTTCATGAT GCGGGTGCGC AGCGACGGGG CACTGCTCGG CGCCGAGCAG
CTGCGGACGC TCGGCGGCAT CTCCACCGAC TTCGCCCGGG ACACCGCCGA CATCACCGAC
CGGCAGAACA TCCAGTACCA CTGGATCGAC ATCGTCGACG TCCCGGAGAT CTGGGACCGC
CTCGCCCGCG TCGGGCTGAC CACCGAGGAG GCCTGCGGCG ACTCCCCCCG TGGGTTCCTC
GGCTCCCCGG TCGCCGGCGT CGCCAAGGAC GAGATCATCG ACGGGACCCC GGCCCTGTTG
GAGATCGGCC GCCGGCGCGC GGGCAACCCC GACTACGCCA ACCTCCCCCG CAAGTTCAAG
ACCTCCGTCT CCGGGCACCC CTCGCTCGAC GCGACGCCGG AGATCAACGA CGTCGCGTTC
GTCGGCGTGG TGCACCCCGA GCTCGGCGCC GGCTTCGACC TGTGGGTCGG CGGCTCCCTG
TCGACCAACC CCTTCCTGTC CGCCAAGATG GGCGTCTGGA TCCCGCTCGA CGAGGTCGCC
GACGTGTGGG AGGGCGTGAT CTCGATCTTC CGGGACTACG GCTACCGGCG CCTCCGGTCC
CGGGCCCGGC TCAAGTTCCT CGTCCAGGAC TGGGGCATCG AGAAGTTCCG CGAGGTGCTC
GAGAACGAGT ACCTCCACCG CCGGCTCCCC GACTGCGCGT CGCCGGAGGT CGCGGCCGGC
AACGGCGACC ACATCGGCGT GCACGAGCAG AAGGACGGCC GGTTCTACGT CGGCGCGAGC
GCGACCGTGG GACGCGTGAG CGGCAGCCTG CTGAGCCGGC TCGGCGACCT GGTCGAGAAG
TACGGCGTGG ACGGGGTCCG GCTCACGGCG TACCAGAAAC TCGTGATCCT CGGCGTCGAC
GGCGCCCGGG TCGACGAGCT GCTCGACGAC CTGGAGCTGA TCGGCCTGTC CGCGCGCCCC
TCCCCATGGC GGCGCTCCAC GATGGCCTGC ACCGGCATCG AGTTCTGCAA GCTGGCGATC
GTCGAGACCA AGCATCGGGC CAGCGCCCTG GTCGACGAGC TGGAGCGGCG CTTCCCCGAC
CTCGACACGC CGATCACCGT CAACGTGAAC GGGTGCCCGA ATGCCTGCGC GCGTACCCAG
GTCGCGGACA TCGGGCTCAA GGGCCAGCTC GTCCTGCACG AGGGCGAGCA GGTCGAGGGC
TTCCAGGTGC ACCTGGGCGG TGGCATCGGG CTCACCCAGC GGCTGGGCCG CAAGCTGCGC
GCGCACAAGG TCACCAGCGC CGGGCTCGAC GACTACATCA CCTCGGTCGT CACCAACTAC
CTCACCGACC GCACCGACGG CGAGGCGTTC GCCGCCTGGG TCGAGCGCGC CGACGAGGAG
CTGCTGCGCG GCGACAAGAC CCTGGAGGCG GTGGCGACAT GA
|
|---|
| Protein sequence | MTDLRYTVQP ASSTEIPRPK RAEGQWALGL REPLNANEQQ KKDDSPLNVR DRIVNVYSKR
GFDSIDPADL RGRFRWYGIY TQRRPGLDGG KTGALEPHEL DDRYFMMRVR SDGALLGAEQ
LRTLGGISTD FARDTADITD RQNIQYHWID IVDVPEIWDR LARVGLTTEE ACGDSPRGFL
GSPVAGVAKD EIIDGTPALL EIGRRRAGNP DYANLPRKFK TSVSGHPSLD ATPEINDVAF
VGVVHPELGA GFDLWVGGSL STNPFLSAKM GVWIPLDEVA DVWEGVISIF RDYGYRRLRS
RARLKFLVQD WGIEKFREVL ENEYLHRRLP DCASPEVAAG NGDHIGVHEQ KDGRFYVGAS
ATVGRVSGSL LSRLGDLVEK YGVDGVRLTA YQKLVILGVD GARVDELLDD LELIGLSARP
SPWRRSTMAC TGIEFCKLAI VETKHRASAL VDELERRFPD LDTPITVNVN GCPNACARTQ
VADIGLKGQL VLHEGEQVEG FQVHLGGGIG LTQRLGRKLR AHKVTSAGLD DYITSVVTNY
LTDRTDGEAF AAWVERADEE LLRGDKTLEA VAT
|
|---|
| |