Gene Noca_2328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2328 
Symbol 
ID4595943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp2482043 
End bp2482849 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content74% 
IMG OID639776927 
Productformamidopyrimidine-DNA glycolase 
Protein accessionYP_923520 
Protein GI119716555 
COG category[L] Replication, recombination and repair 
COG ID[COG0266] Formamidopyrimidine-DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.464871 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCTGAGG GCGACGCCGT GTGGCGCACC GCCGAGCGCC TGCGCCGGGC GCTCGACGGG 
CAGCGGCTGG TGCGCACCGA CCTCCGCGTC CCGCAGCACG CCACCACCGA CCTCTCGGGC
GGCACGGTCC TCGAGACCGT CTCCCGCGGC AAGCACCTGC TCACCCGGAT CAACACCCAC
TCCGACCACG GGGCCGAGGA CTGGACGCTG CACACCCACC TGAAGATGGA GGGTTCGTGG
CGCGTCTACC GCGCCGGCGA GCGCTGGACC AAGCCCGCCC ACCTGGCCCG GGTGGTGCTC
GACGTCGGCG GCCGCAGCGC CGTCGGCTTC CAGCTCGGCG TGGTGGACCT GCTGCCCCGC
GAGCGTGAGG ACGAGGTCGT CGGGCACCTG GGTCCGGACC TGCTCGGCCC GGACTGGGAC
GCCGAGGAGG CGGTCCGCCG GCTCACCGCC GACCCGACCC GACCGCTCGG CGAGGCCCTG
CTGGACCAGC GCAACCTCGC CGGGATCGGG ACGATCTACC GCAGCGAGCT GTGCTTCCTC
ACCGGCTACG ACCCGCGCGA CCCGCTCGCC GTGGTCGCCG ACCCGCTCCG GATGGTCCGG
CTGGCGCGCT CGATGCTCGA CCAGAACCGC CACCAGGCCC AGATCTGCAC CACCGGCGAC
AAGCGCCGGG GCCGCAGCCT CTGGGTCTAC GGGCGCTCCG GCGAGCGCTG CCTGCGGTGC
GGCACGACGA TCGTGCACGA CCAGCTCGGT CAGCCGGGGC GCGAGCGAAT CGCCTACTGG
TGCCCGTCCT GCCAGCCACG CCGCTAG
 
Protein sequence
MPEGDAVWRT AERLRRALDG QRLVRTDLRV PQHATTDLSG GTVLETVSRG KHLLTRINTH 
SDHGAEDWTL HTHLKMEGSW RVYRAGERWT KPAHLARVVL DVGGRSAVGF QLGVVDLLPR
EREDEVVGHL GPDLLGPDWD AEEAVRRLTA DPTRPLGEAL LDQRNLAGIG TIYRSELCFL
TGYDPRDPLA VVADPLRMVR LARSMLDQNR HQAQICTTGD KRRGRSLWVY GRSGERCLRC
GTTIVHDQLG QPGRERIAYW CPSCQPRR