Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_2328 |
Symbol | |
ID | 4595943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 2482043 |
End bp | 2482849 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639776927 |
Product | formamidopyrimidine-DNA glycolase |
Protein accession | YP_923520 |
Protein GI | 119716555 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.464871 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCTGAGG GCGACGCCGT GTGGCGCACC GCCGAGCGCC TGCGCCGGGC GCTCGACGGG CAGCGGCTGG TGCGCACCGA CCTCCGCGTC CCGCAGCACG CCACCACCGA CCTCTCGGGC GGCACGGTCC TCGAGACCGT CTCCCGCGGC AAGCACCTGC TCACCCGGAT CAACACCCAC TCCGACCACG GGGCCGAGGA CTGGACGCTG CACACCCACC TGAAGATGGA GGGTTCGTGG CGCGTCTACC GCGCCGGCGA GCGCTGGACC AAGCCCGCCC ACCTGGCCCG GGTGGTGCTC GACGTCGGCG GCCGCAGCGC CGTCGGCTTC CAGCTCGGCG TGGTGGACCT GCTGCCCCGC GAGCGTGAGG ACGAGGTCGT CGGGCACCTG GGTCCGGACC TGCTCGGCCC GGACTGGGAC GCCGAGGAGG CGGTCCGCCG GCTCACCGCC GACCCGACCC GACCGCTCGG CGAGGCCCTG CTGGACCAGC GCAACCTCGC CGGGATCGGG ACGATCTACC GCAGCGAGCT GTGCTTCCTC ACCGGCTACG ACCCGCGCGA CCCGCTCGCC GTGGTCGCCG ACCCGCTCCG GATGGTCCGG CTGGCGCGCT CGATGCTCGA CCAGAACCGC CACCAGGCCC AGATCTGCAC CACCGGCGAC AAGCGCCGGG GCCGCAGCCT CTGGGTCTAC GGGCGCTCCG GCGAGCGCTG CCTGCGGTGC GGCACGACGA TCGTGCACGA CCAGCTCGGT CAGCCGGGGC GCGAGCGAAT CGCCTACTGG TGCCCGTCCT GCCAGCCACG CCGCTAG
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Protein sequence | MPEGDAVWRT AERLRRALDG QRLVRTDLRV PQHATTDLSG GTVLETVSRG KHLLTRINTH SDHGAEDWTL HTHLKMEGSW RVYRAGERWT KPAHLARVVL DVGGRSAVGF QLGVVDLLPR EREDEVVGHL GPDLLGPDWD AEEAVRRLTA DPTRPLGEAL LDQRNLAGIG TIYRSELCFL TGYDPRDPLA VVADPLRMVR LARSMLDQNR HQAQICTTGD KRRGRSLWVY GRSGERCLRC GTTIVHDQLG QPGRERIAYW CPSCQPRR
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