Gene Noca_2283 details

Gene Information

• Locus tag: Noca_2283
• ID: 4595831
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: -
• Start bp: 2433283
• End bp: 2433744
• Gene Length: 462 bp
• Protein Length: 153 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 639776882
• Product: T/G mismatch-specific endonuclease
• Protein accession: YP_923475
• Protein GI: 119716510
• COG category: [L] Replication, recombination and repair
• COG ID: [COG3727] DNA G:T-mismatch repair endonuclease
• TIGRFAM ID: [TIGR00632] DNA mismatch endonuclease Vsr

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCAAGA CCAAAACGCA AGTAGTCCAG CCGCGCGATC CGGCCGTGAC CAGTCGCATC 
ATGAGCGCGG TTCGCGCGAA GGACACCAAG CCCGAGCTCC TCCTCCGCCG CGCCGTGCAT 
GCGCGCGGCG GCCGATACCG CCTGCACGCG CCGGACGTGC CGGGGCGCCC AGACCTGGTG 
GTTCGCGGCA AGAAGATCGC CATCTTCGTC GACGGCGACC TTTGGCACGG CAACCCCGCA 
GAGTGGCGAC GTCGGGGCAA GGACGATCTG GCTGGTTTGT TCCCCACCCG GACCCAGTGG 
TGGGTGGACA AGATCGAACG GAACGTCCGA CGAGATCAGG ACGTCGACCG AGAGCTAGCC 
GCACGGGGAT GGAGGGTGCT GCGCCTTTGG GCGAGCGACA TCATCGCCGA TCCAGACGCC 
GCAGCCGACC GCGTGATCAT CGCCCTGCGG GAAGACTCAT GA 

 

Protein sequence

MTKTKTQVVQ PRDPAVTSRI MSAVRAKDTK PELLLRRAVH ARGGRYRLHA PDVPGRPDLV 
VRGKKIAIFV DGDLWHGNPA EWRRRGKDDL AGLFPTRTQW WVDKIERNVR RDQDVDRELA 
ARGWRVLRLW ASDIIADPDA AADRVIIALR EDS