| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2222 |
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| Symbol | |
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| ID | 4598720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 2369027 |
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| End bp | 2370706 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639776822 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_923415 |
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| Protein GI | 119716450 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACCA ACGGACACCA CCCGGAGACC AACCGCCGCG ACCCGCTGCG CGCAGACGAG
TGGCTTGAGG CCCGCCATCC CGCGAACCGT GAGCAGACCT CGCCGTTCGC CCGAGGACGC
GGTTCCAACG GCACCCCGCC GCCCCCGCCG GTCGTCGAGG ACGACGACCC GACCTCGCTG
CCGATCTTCG CCGGCGCCTG GACCAGCGAA GGCGAGGGCC AGATGCCTGG CCGCGCCCGC
TCGGAGTTCA GCCTGCGCCC GCTTGTGGCG CCCGCACCGG AGCAGCACCA AGACACCCGC
GGCACGGATG GCGAGGTCGA GCTGGACTGG GAGCTGATCG CGCAATACCG CGCTGAGATC
TCCGCGCGAC TGACCGCCCG GCTCGACAAG GAAGGTGGTC GGGTCACCGA GGAGGACCGC
GAGCAGATGG GCCTCGACGT CATCGAGGAG CTCATCAAAT CCGAGGCCGA GACGTTGGTC
TCGACCGGCC GTCCGCCGTG GACGAAGGAC CACGAGAAGG CACTCAAGTC CGCCCTCCAC
GCCGCCCTGT TCGGGCTCGG CCGCCTGCAG CCCCTGGTCG AGCGCGAGGA CGTCGAGAAC
ATCATCGTCA TCGCCCGCGG CCCGGTCTGC TCGGTGTGGC TGGAGCTGGT CGACGGCACC
CTTGTGGAGG CCGCCCCGAT CGCCGACTCC GAGGACGAGC TGCGCGAGTT CCTCTCCGAC
CTAGGCGCAC GGCAGAACCG GCCCTTCACC GAGGCCCGGC CGCACCTGGA CCTCCGGCTG
CCCGGGGGAG CGCGGCTCGC GGCCGGCTCC TGGGTGATGG CCTACACCTC CGTCGTGATC
CGTCGCCACA GCATGCGCGA GGTGTCGATG GACGAGATGG TCTACGACCG CAAGGCGTGC
AGCGCGGTCC TGGCCGACTT CGTCGCAACC TGCGTGCGGG CGGGCAAGAG CATCGTCGTC
TCCGGGGTCC AAGGCAGCGG CAAGACCACC TGGGTCCGGG CCCTGTGCTC GTGCATCCCG
CCCTGGGAGA TGATCGGCAC CTTCGAAACC GAGTTCGAGC TGCACCTGCA CGAGCTCGTC
GACCGCCACA AGATCGTCCA CGCGTGGGAG CACCGCCCCG GATCCGGCGA GGTCGGCATC
GACGGCCGCC AGGCCGGTGA GTTCAGCCTC GAGGAGGCCA TCCACCACTC CTTCCGGTTC
AGCCTCGCCC GCCAGATCGT CGGTGAGGTC CGCGGCCCGG AGGTCTGGAA CATGCTCAAG
GCCATGGAGT CCGGGCCGGG CTCGATCAGC ACCACCCACG CCCGCAGTGC CGAGCACACG
ATCGAGAAGC TCGTCTCCTG CGCCATGGAG AAAGGCCCCC AGGTCACCCG CGAGCTGGCG
ATCAGCAAGC TGGCCGCCGC GATCGACATC GTGATGTACC TGCGCTCGGA GGTCGTCGCC
AATCCCGACG GCACCTTCCG CAAGCAGCGC TGGGTCGAGG AGGTCCTGGT CGTCCAGCCC
AGCATCGACG CCGCCAGGGG ATACGCCACC ACCCCGATCT TCACCCCTAA CCAGCTCGGC
CAGGCCGTCG CGACCGGCAA GCTCGACAAC TTCCTCGCCC AGGAGCTGGC GCGGCATGGG
TTCGACCTCG AGGCGTACAA GGCCGAGTCC CAGGCCAACC CGGGGGTGGC CACCTCATGA
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| Protein sequence | MSTNGHHPET NRRDPLRADE WLEARHPANR EQTSPFARGR GSNGTPPPPP VVEDDDPTSL
PIFAGAWTSE GEGQMPGRAR SEFSLRPLVA PAPEQHQDTR GTDGEVELDW ELIAQYRAEI
SARLTARLDK EGGRVTEEDR EQMGLDVIEE LIKSEAETLV STGRPPWTKD HEKALKSALH
AALFGLGRLQ PLVEREDVEN IIVIARGPVC SVWLELVDGT LVEAAPIADS EDELREFLSD
LGARQNRPFT EARPHLDLRL PGGARLAAGS WVMAYTSVVI RRHSMREVSM DEMVYDRKAC
SAVLADFVAT CVRAGKSIVV SGVQGSGKTT WVRALCSCIP PWEMIGTFET EFELHLHELV
DRHKIVHAWE HRPGSGEVGI DGRQAGEFSL EEAIHHSFRF SLARQIVGEV RGPEVWNMLK
AMESGPGSIS TTHARSAEHT IEKLVSCAME KGPQVTRELA ISKLAAAIDI VMYLRSEVVA
NPDGTFRKQR WVEEVLVVQP SIDAARGYAT TPIFTPNQLG QAVATGKLDN FLAQELARHG
FDLEAYKAES QANPGVATS
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