Gene Noca_2066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2066 
Symbol 
ID4595820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp2211435 
End bp2212217 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content79% 
IMG OID639776669 
ProductLmbE family protein 
Protein accessionYP_923262 
Protein GI119716297 
COG category[S] Function unknown 
COG ID[COG2120] Uncharacterized proteins, LmbE homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.788335 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCACGG TCGTGTCCTT CCACGCCCAC CCCGACGACG AGGCGCTGCT CACCGGCGGC 
TGGCTCGCCC AGCGGGCCGC GGCCGGGGAC CGCGTGGTGC TGGTGTTCGC CACCGACGGG
GGAGCGGGAC TGACCTCCGC AGCGGGCCCG GTCGGCACCC TCGGCGTACG CCGTCGGGCC
GAGGCGTACG CCGCCGCCCG CGCCCTCGGC GCTGCCGCCG TCGTCTGGCT CGGGTACGCC
GACTCCGGGA TGGCCGACGC CCCGAGCGGC CTGGTCGACC GGTTCGCGGA CGCGCCGCTC
GCCGACGCCG CCCGGCGGCT GGCCGCGGTC CTCGACGAGG AGGACGCCGA CGTCCTGACC
GGCTACGACG CGAACGGCGG GTACGGCCAC CCGGACCACG TCCAGGTGCA CCACGTCGCC
CGCGCCGCGC AGGCCCTGGC CGCTCGGCCG CCGTACCTGC TGGAGGCCAC CCGGGACCGG
ACCTGGCTGG CCCGCGGGAT CGCCCTGCTC CGCCCGTTCG CCCGGGCGCT CCCGGGCCTC
ACCCTGCCGG GCCGCGACAT CTACTCGGCG CGCCCCCGGG TGTCGTTGCG GGTCGACGTC
CGCGACCAGC TCCCCGCGAA GCGCGCCGCC CTGGCCGCCC ACACGTCCCA GGCCACCGGC
GGCGTCCGCA CCCTCGCGGT GCTGCGGCTC CTGCCGACCT GGCTCGCCCG CCGGGTGCTC
GGCACCGAGT GGTTCATCGA GGTGCCTGGT CGGGCGGCCG GTGCGCCGGC GTCGAGCCCC
TGA
 
Protein sequence
MATVVSFHAH PDDEALLTGG WLAQRAAAGD RVVLVFATDG GAGLTSAAGP VGTLGVRRRA 
EAYAAARALG AAAVVWLGYA DSGMADAPSG LVDRFADAPL ADAARRLAAV LDEEDADVLT
GYDANGGYGH PDHVQVHHVA RAAQALAARP PYLLEATRDR TWLARGIALL RPFARALPGL
TLPGRDIYSA RPRVSLRVDV RDQLPAKRAA LAAHTSQATG GVRTLAVLRL LPTWLARRVL
GTEWFIEVPG RAAGAPASSP