Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_2066 |
Symbol | |
ID | 4595820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 2211435 |
End bp | 2212217 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 79% |
IMG OID | 639776669 |
Product | LmbE family protein |
Protein accession | YP_923262 |
Protein GI | 119716297 |
COG category | [S] Function unknown |
COG ID | [COG2120] Uncharacterized proteins, LmbE homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.788335 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCACGG TCGTGTCCTT CCACGCCCAC CCCGACGACG AGGCGCTGCT CACCGGCGGC TGGCTCGCCC AGCGGGCCGC GGCCGGGGAC CGCGTGGTGC TGGTGTTCGC CACCGACGGG GGAGCGGGAC TGACCTCCGC AGCGGGCCCG GTCGGCACCC TCGGCGTACG CCGTCGGGCC GAGGCGTACG CCGCCGCCCG CGCCCTCGGC GCTGCCGCCG TCGTCTGGCT CGGGTACGCC GACTCCGGGA TGGCCGACGC CCCGAGCGGC CTGGTCGACC GGTTCGCGGA CGCGCCGCTC GCCGACGCCG CCCGGCGGCT GGCCGCGGTC CTCGACGAGG AGGACGCCGA CGTCCTGACC GGCTACGACG CGAACGGCGG GTACGGCCAC CCGGACCACG TCCAGGTGCA CCACGTCGCC CGCGCCGCGC AGGCCCTGGC CGCTCGGCCG CCGTACCTGC TGGAGGCCAC CCGGGACCGG ACCTGGCTGG CCCGCGGGAT CGCCCTGCTC CGCCCGTTCG CCCGGGCGCT CCCGGGCCTC ACCCTGCCGG GCCGCGACAT CTACTCGGCG CGCCCCCGGG TGTCGTTGCG GGTCGACGTC CGCGACCAGC TCCCCGCGAA GCGCGCCGCC CTGGCCGCCC ACACGTCCCA GGCCACCGGC GGCGTCCGCA CCCTCGCGGT GCTGCGGCTC CTGCCGACCT GGCTCGCCCG CCGGGTGCTC GGCACCGAGT GGTTCATCGA GGTGCCTGGT CGGGCGGCCG GTGCGCCGGC GTCGAGCCCC TGA
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Protein sequence | MATVVSFHAH PDDEALLTGG WLAQRAAAGD RVVLVFATDG GAGLTSAAGP VGTLGVRRRA EAYAAARALG AAAVVWLGYA DSGMADAPSG LVDRFADAPL ADAARRLAAV LDEEDADVLT GYDANGGYGH PDHVQVHHVA RAAQALAARP PYLLEATRDR TWLARGIALL RPFARALPGL TLPGRDIYSA RPRVSLRVDV RDQLPAKRAA LAAHTSQATG GVRTLAVLRL LPTWLARRVL GTEWFIEVPG RAAGAPASSP
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