7 homologs were found in PanDaTox collection
for query gene Noca_1964 on replicon NC_008699
Organism: Nocardioides sp. JS614



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008699  Noca_1964  hypothetical protein  100 
 
 
340 aa  665    Nocardioides sp. JS614  Bacteria  decreased coverage  0.000124061  n/a   
 
 
-
 
NC_009972  Haur_1961  hypothetical protein  28.16 
 
 
333 aa  117  3.9999999999999997e-25  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.215291  n/a   
 
 
-
 
NC_013235  Namu_1662  aminoglycoside phosphotransferase  31.67 
 
 
345 aa  108  1e-22  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00294104  normal  0.0803767 
 
 
-
 
NC_006365  plpp0103  hypothetical protein  21.48 
 
 
325 aa  58.5  0.0000001  Legionella pneumophila str. Paris  Bacteria  normal  0.355648  n/a   
 
 
-
 
NC_013947  Snas_5106  aminoglycoside phosphotransferase  24.78 
 
 
440 aa  51.2  0.00002  Stackebrandtia nassauensis DSM 44728  Bacteria  hitchhiker  0.00610606  normal  0.334332 
 
 
-
 
NC_013595  Sros_1526  hypothetical protein  26.71 
 
 
405 aa  48.1  0.0002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.01571 
 
 
-
 
NC_006365  plpp0117  hypothetical protein  19.57 
 
 
321 aa  44.7  0.002  Legionella pneumophila str. Paris  Bacteria  normal  n/a   
 
 
-
 
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