Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_1845 |
Symbol | |
ID | 4597165 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 1970515 |
End bp | 1970862 |
Gene Length | 348 bp |
Protein Length | 115 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639776444 |
Product | endoribonuclease L-PSP |
Protein accession | YP_923043 |
Protein GI | 119716078 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0574701 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCTTC CACTCCGTCC CGCCGTTGCC GCCGGCGACT TCGTCGCCAT CTCGGGCCAG GTCGGCGTCG CCGATGGTGC CCTCGTCGAG GGCGGGATCA GCGCCGAGGC CAGGCAAGGC CTGGCCAACC TGGTCGCCGT GCTCGAGGCG AACGGGCTGA CCACCGCAGA CGTGGTGAAG ACCAATGTGT TCCTGACCTC GATGGACGAC TTCGCCGCGA TGAACGAGGA GTACGCCAAG GTCTTCACCG AGGACTTCCC GGCGCGGTCC GCGGTCGCGG TGCACCAGCT CCCGATCGGC GCGGTCTTCG AGATCGAGGC GTGGGCCTAC CGCGGGAACC AGCGGTGA
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Protein sequence | MSLPLRPAVA AGDFVAISGQ VGVADGALVE GGISAEARQG LANLVAVLEA NGLTTADVVK TNVFLTSMDD FAAMNEEYAK VFTEDFPARS AVAVHQLPIG AVFEIEAWAY RGNQR
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