Gene Noca_1764 details

Gene Information

• Locus tag: Noca_1764
• Symbol: atpC
• ID: 4597676
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: +
• Start bp: 1873849
• End bp: 1874250
• Gene Length: 402 bp
• Protein Length: 133 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 639776364
• Product: F0F1 ATP synthase subunit epsilon
• Protein accession: YP_922964
• Protein GI: 119715999
• COG category: [C] Energy production and conversion
• COG ID: [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)
• TIGRFAM ID: [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria)

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCGAGT CCGGGGAGCA CCTGCACGTC GAGCTCGTCG CCGCCGACCG GACCGTCTGG 
TCCGGAGAGG CGGAGATGGT GATCGCGCGG ACCACCGAGG GAGACGTCGG GGTGCTGCGC 
GGTCACGCGC CGCTGCTGTC GCTGCTCAGC GACGCGGTCG TCGAGATCTC GTCGTCCGAC 
GGCGGTGTCG TCATCGCGGC AGTCGACGGT GGCTTCCTCT CGGTGGCCAA CGACCGGGTG 
TCGGTGCTCT CCCAGCGGGC GCTCCTGCCC GAGGAGATCG ACGTCGACGA GGCCCGGGTC 
GAGCTGGAGG AGGCGCGCGG CCTGATCGGC GCGAACGACG AGGCGGAGCG GCGGCTGCGC 
CGTGCCGAGG CGAGGATCCG GGCGGTCGAG CGCGCGTCCT GA 

 

Protein sequence

MAESGEHLHV ELVAADRTVW SGEAEMVIAR TTEGDVGVLR GHAPLLSLLS DAVVEISSSD 
GGVVIAAVDG GFLSVANDRV SVLSQRALLP EEIDVDEARV ELEEARGLIG ANDEAERRLR 
RAEARIRAVE RAS