Gene Noca_1684 details

Gene Information

• Locus tag: Noca_1684
• Symbol: ribA
• ID: 4599723
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: +
• Start bp: 1790692
• End bp: 1791294
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 639776283
• Product: GTP cyclohydrolase II
• Protein accession: YP_922884
• Protein GI: 119715919
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0807] GTP cyclohydrolase II
• TIGRFAM ID: [TIGR00505] GTP cyclohydrolase II

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.106348
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACGGCCG CGGTCCGCAC CGAGCTGATG GTCCCGCTGC GCCTCGCGGA CGGCTGGTCC 
ACGCTCGCGC GGCTCTACAC CTTCGACGGC CTCACCGACC CCGGGGAGCA CCTCGCCCTG 
CGGCTCGGCT CGCCCGGCGA CGTACCCCTC GTGCGGGTGC ACAGCGAGTG CCTCACCGGC 
GACGTCTTCG GCAGCCAGCG CTGCGACTGC GGCCCCCAGC TCCACGAGGC GTTCCGGCGC 
GTCGACGCCG TCGGCGGGTA CGTGCTCTAC CTGCGCCAGG AGGGGCGCGG CATCGGGCTC 
TACCCCAAGC TGGACGCCTA CGCCCTCCAG GACGCCGGCC TCGACACCTA CGAGGCGAAC 
GTCGCGCTCG GGTACGGCGA GGACGAGCGC GACTACTCGG TCGCGGCCCA GATGCTCACC 
GCGCTCGGTG TCTCCCGGGT CGCGCTGCTC AGCAACAACC CGGACAAGGC CGAGCAGCTG 
GCCCTCGACG GGATCACGGT CGCCGCCCGC GTCCCGACCG CCGTCCACCG CTCCGAGGCG 
AATGCGCGCT ACCTCGCCGC GAAGGCCCAG CACGCCGACC ACACCCTCGA CCTGGGCGCC 
TGA 

 

Protein sequence

MTAAVRTELM VPLRLADGWS TLARLYTFDG LTDPGEHLAL RLGSPGDVPL VRVHSECLTG 
DVFGSQRCDC GPQLHEAFRR VDAVGGYVLY LRQEGRGIGL YPKLDAYALQ DAGLDTYEAN 
VALGYGEDER DYSVAAQMLT ALGVSRVALL SNNPDKAEQL ALDGITVAAR VPTAVHRSEA 
NARYLAAKAQ HADHTLDLGA