| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1662 |
|---|
| Symbol | |
|---|
| ID | 4600041 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 1765774 |
|---|
| End bp | 1767744 |
|---|
| Gene Length | 1971 bp |
|---|
| Protein Length | 656 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639776261 |
|---|
| Product | heavy metal translocating P-type ATPase |
|---|
| Protein accession | YP_922862 |
|---|
| Protein GI | 119715897 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2217] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.805882 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAACC ACCGAGAGCA CCTCAGACAC GTGGCCGATC ACCTGTCGGC CGTGCGGTCG
GGACGGTGGA CCGTCCCGAC CGTGTCCGGT GTCCTGATCG TCCTGGCGCT GCTGGCGGAC
CGGCTGCTCG TCTCGTCGCT CCCGGGCGAC GTGGCGATGG TCGCCGCGGC CGTGGTCGCC
GGCGCCCCGA TCGCGGTGAA GGCCGTCAAC GCGCTCCGGG CGTCGGTCAT CGGCATCGAC
CTCCTCGTCG CGGTCGCCTC GATCGGCGCC ATCGCCATCG GCGAGTTCTG GGAGGCGGCC
GCGGTCACCT TCCTGTTCGC GGTCGGTCAC GCACTGGAGA CCGCCACCTT GAACAAGACC
CGGTCCGCGC TGGCCGCCCT CGTGGCCGTC GCCCCGGACG GCGCCGTCGT CCTGCGCGAC
GGGGTCCAGG TCGAGGTCCC CGCCGGCCAG GTCGGGACCG GCGAGACCGT GCTGGTGAAG
AACGGCGCCA AGGTTCCGGT CGACGGCGTC GTGATCGGCG GCACCGGCGC CCTGGACGAG
GCCTCCATCA CCGGGGAGTC CATCCCGGTC GAGAAGAGCG CGGGCGACCA GGTCTTCGCC
GGCACGGTCT CGCGCGGCGG GTTCCTGCGG GTCCGGGCGA CCGGGGTCGG CAGCGACACC
ACGCTGGCGC GGATCATCCA CCGGGTCGAG GAGGCCCAGG ACGCCAAGGC CGAGACGCAG
CTGTTCATGG ACCGGTTCTC GGCCTGGTAC ACGCCCGCGA TCATGGTCCT GGCCCTCGTG
GCCGGCGTGA TCAGCGGCGA CATCGTGCTC GGCCTGACCC TCCTGGTCAT CGGCTGCCCC
GGTGCCCTGG TGATCTCGAT CCCGGTCTCG ATCGTCGCCG GGATCGGACG GGCCGCCAAG
GACGGCATCC TGATCAAGGG CGGGGAGTAC CTCGAGACCT CCGCGCGGAT CAGCGCGGTC
GCGGTCGACA AGACCGGCAC CCTGACCCGC GGCCGGCCGC AGCTGACCGA CGTGGTCGTG
CTCGACCCGG GCCTCGACCG GGCTCAGGTG CTCACCTGGG CCGCTCGCGG CGAGGCCGGC
TCCGAGCACC CGCTGGCGCG GACCATCCTC GACGCCGCGA CCGCGGACGG CCTGGGCGTC
CAGGGCCTGC CGGAGCACAC GGAGCCGTTC CCCGGCAAGG GCATCACCGC CACCGCAGAG
GGACATCGCA TCCTGATCGG CAACCTCGCC CTCCTCGAGC AGTTCGGGAT CGCCGACACG
GAGGCCGCGG CACGGACCGC CGAGGAGCTC TCCCAGGCGG GACGCACCCC GATGATCGTG
GCGGTCGACG ACCGGGTGGT CGGCGTCGTC GCCGTCGCCG ACGAGATCCG CCGCGACGCG
GCCAGGATGG TCGCCGAGCT GCACGCGGCC GGCGTCAGGA AGGTCGTCAT GCTCACCGGT
GACGCCCGGC TCGTGGCCGA GGCGGTCGGT ACCGCGACCG GCGTCGACGA GGTGCGCGCC
GGCCTGCTGC CCGAGGACAA GCTCGAGGCC ATCCTCGAGC TGCAGCGCGA GGGACACACC
GTCGCGATGG TCGGCGACGG CGTGAACGAC GCGCCGGCAC TCGCGACCGC CGACATCGGC
GTCGCCATGG GGGCGGCCGG GTCCGCTGTG GCCGTCGAGA CGGCGGACAT CGCGCTGATG
GGTGACAACC TGCTGCGGCT GCCCGAGGCG ATCTCGCTGG CCCGTCGGAC CGTGGCGAAC
ATGCGGCAGA ACATCACCAT CGCCGTCACG ACGGTCGCGT TCCTGCTCCT CGGGGTGCTC
CTCGGCGGCG TGACCATGGC CATCGGGATG CTCGTCCACG AGGTCTCGGT GCTCGTCGTG
ATCGTCAATG CGATGCGGCT GCTGCGAGCG CGCAAGTACC GGTCCGACGA CCCGGGCGCC
TCCGCGAGGA TCCGGCCGCC GGCCGACCGC TCCGTCCCCC AGGCGGCGTG A
|
|---|
| Protein sequence | MPNHREHLRH VADHLSAVRS GRWTVPTVSG VLIVLALLAD RLLVSSLPGD VAMVAAAVVA
GAPIAVKAVN ALRASVIGID LLVAVASIGA IAIGEFWEAA AVTFLFAVGH ALETATLNKT
RSALAALVAV APDGAVVLRD GVQVEVPAGQ VGTGETVLVK NGAKVPVDGV VIGGTGALDE
ASITGESIPV EKSAGDQVFA GTVSRGGFLR VRATGVGSDT TLARIIHRVE EAQDAKAETQ
LFMDRFSAWY TPAIMVLALV AGVISGDIVL GLTLLVIGCP GALVISIPVS IVAGIGRAAK
DGILIKGGEY LETSARISAV AVDKTGTLTR GRPQLTDVVV LDPGLDRAQV LTWAARGEAG
SEHPLARTIL DAATADGLGV QGLPEHTEPF PGKGITATAE GHRILIGNLA LLEQFGIADT
EAAARTAEEL SQAGRTPMIV AVDDRVVGVV AVADEIRRDA ARMVAELHAA GVRKVVMLTG
DARLVAEAVG TATGVDEVRA GLLPEDKLEA ILELQREGHT VAMVGDGVND APALATADIG
VAMGAAGSAV AVETADIALM GDNLLRLPEA ISLARRTVAN MRQNITIAVT TVAFLLLGVL
LGGVTMAIGM LVHEVSVLVV IVNAMRLLRA RKYRSDDPGA SARIRPPADR SVPQAA
|
|---|
| |