Gene Noca_1560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1560 
Symbol 
ID4595500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1653915 
End bp1655375 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content72% 
IMG OID639776159 
ProductATPase domain-containing protein 
Protein accessionYP_922761 
Protein GI119715796 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGGC TCTGGGCACG CCTCTCCCGG TTGCCGCTGC GGGTCCGTCT GGTCGCCGGC 
TTCTCCGCCG CCAGCCTTGT GGTGCTGATC GGTGCCGGGG TGTTCGTGTA CTGGCGCGTC
GACTACGCCC TGGACCGCGG CCTGGACACC GAGCTCACCC AGGCCAGCCA GACGCTCAGG
CCACTGGTGC GGTCCAACGG CGCGGTGAGC AGCCGGACGG CGGCCGACGC CACCGGCGTG
GCCTGGCAGG TACTCGACGC GGACGGCACC GTCCTCGACC ACGGTGGTCC GGCCGGCGCG
ACCAGCCTGT TGAGCTCACG ACAGCTGGAC CGGGTGACGA CGACGCCACG CACCTTCGAT
GTCGGCGACT TCCTCCCCGT CTCATCCGAG CCGTATCGCC TGCAGGTCGT CGAGCTGTCG
GCGACCCCCC AGCGCTACCT GCTGGTCGGG GTACGGCGCG ATCACCGCGA CGAGGCGCTG
CGGGAACTCC TCGTGCAGCT CACCGTCGCC GGGCTCGGGG CTCTTCTCGT TACTGGCCTG
GTGGGCGAGC GACTGGCCCG GGCCGCGCTG CGACCTGTCG AGCGGTACCG CCGCCGTGCC
GCCGCGATCG CGGCCGGCAA CACCAGCCTC CGGCTCGACG TGCCGCCCCT GCGCGAGGAC
GAGATCACCC GCCTGGGGCA CACCTTCAAC GACATGCTCA CCACCCTCGA GGGCGCCCTG
GACCGAGAAC GGCAATTCGT CACCGAGGCC AGCCACGAGC TACGCACCCC GATCACGCTG
CTGACTAGCC GGATCCAGTT GGCCCTGCGG CGCCCCCGCA GCCCGGCCGA CCACGAACGC
ATCCTCACCG AGCTCAAGGT CGACCTCGAC CGGCTCGCCG CGCTCTCCGA GCAGCTCCTC
CAACTCGGCC GGGTCGACGG CAACCACATC GCCGGGCGTA GCGACCTGGT GAGCGTCGCC
AGCCGCACGG TCAACCAACG GCGTCTCGCC GATCCCCGGC ACGCGGGGAA CATCACCGTC
ACCCTGCCCG AACGCCGCGT GCCGGTGCCG ATGGCCGACT TCGAGCTGGA GCGGGTGGTC
ACCAACCTCC TGGACAACGC CGTCGTCCAC GGGGCCCCGC CGGTCGAGGT GAGCGTCGAT
GAACCGGCCC CGGGGTGGGC GCGGCTGATC GTCACCGACG CCGGGGTCGG CATGCCACCC
GGCCTGTTGG CAACCGCGAC CCAGCGCTTC GCCCGGGCGG ACGACGCGCG ACCGCGCCCC
GGGTCGGGGC TCGGGCTCGC CCTGGTCGAC GCGCTGGTCA CCGGAGCGAG CGGTGAGCTG
CGGCTGTGCC ACGACGGGCG GCACTCCATT CACGGTCACC CCGCACCGAT CGCCTGTGCC
CACGGGCCGC AGATGACGGT CACGGTGCTC CTGCCGACGA CACCCGAGTC CGACGCATCA
GCGGCACTGC CTGCTGCGTA G
 
Protein sequence
MSRLWARLSR LPLRVRLVAG FSAASLVVLI GAGVFVYWRV DYALDRGLDT ELTQASQTLR 
PLVRSNGAVS SRTAADATGV AWQVLDADGT VLDHGGPAGA TSLLSSRQLD RVTTTPRTFD
VGDFLPVSSE PYRLQVVELS ATPQRYLLVG VRRDHRDEAL RELLVQLTVA GLGALLVTGL
VGERLARAAL RPVERYRRRA AAIAAGNTSL RLDVPPLRED EITRLGHTFN DMLTTLEGAL
DRERQFVTEA SHELRTPITL LTSRIQLALR RPRSPADHER ILTELKVDLD RLAALSEQLL
QLGRVDGNHI AGRSDLVSVA SRTVNQRRLA DPRHAGNITV TLPERRVPVP MADFELERVV
TNLLDNAVVH GAPPVEVSVD EPAPGWARLI VTDAGVGMPP GLLATATQRF ARADDARPRP
GSGLGLALVD ALVTGASGEL RLCHDGRHSI HGHPAPIACA HGPQMTVTVL LPTTPESDAS
AALPAA