Gene Noca_1480 details

Gene Information

• Locus tag: Noca_1480
• ID: 4596296
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: +
• Start bp: 1566840
• End bp: 1567379
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 78%
• IMG OID: 639776078
• Product: hypothetical protein
• Protein accession: YP_922681
• Protein GI: 119715716

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.000178827
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAACCCCC TGCGGGGGTA CGGCGAGCCG GACGACTGGG CCCGCTCCCA GGTCGCGCTG 
CGGATGCTGG TCCTGGCCGG GCCGGTCGTG GCGGTGCTCG CTGCCGGACC GGCCGGTCAT 
GCGGCACCGT GGTGGCTGGT CGGCGTGGTC GCCGCCCTCG CCGGAGCCTC GGCCTGGGTC 
CCGGACTCGC CGTTCGGGGT GGCGCCGTTC CTGGTCGTGC TCGGCTGGTG GGCGGCCGCG 
CTCGGAGACG CCTCCTCGGC GTGGGTGCTG GTCGCCGCCG CCGGGCTGGT CGTGGCGCAC 
GTCGCCGGCG CGGTCGCGTC GTACGGCCCG GCCACGATGC CGGTCGACGC CGCCACCGCC 
GGCCTGTGGG CGCGTCGGGG GCTGCTGGTG CTGCTGACCG CGCCGGTAGC CTGGGTCACG 
GCCCGGCTGC TGCGCGACCA GCCGGAGCAG CCCGGCGTCT GGGTGCTCGG CGTCGCGGCC 
GCGTGCCTGG CCACCGTCGT CGCGACCGCC GCGTTGGGGA CCCGTGAGGA GGACCGGTGA 

 

Protein sequence

MNPLRGYGEP DDWARSQVAL RMLVLAGPVV AVLAAGPAGH AAPWWLVGVV AALAGASAWV 
PDSPFGVAPF LVVLGWWAAA LGDASSAWVL VAAAGLVVAH VAGAVASYGP ATMPVDAATA 
GLWARRGLLV LLTAPVAWVT ARLLRDQPEQ PGVWVLGVAA ACLATVVATA ALGTREEDR