Gene Noca_1319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1319 
Symbol 
ID4598557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1391200 
End bp1392354 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content74% 
IMG OID639775913 
Producthistidine kinase, dimerisation and phosphoacceptor region 
Protein accessionYP_922520 
Protein GI119715555 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACCGGC CGACGCCCGA GGAGTACCAG CCCCGCCTGC GGGCCTGGGG CCACGTGTGG 
CGGGTCGCGC TGATGCTCTC GATCAGCGCA CTGTCGTGGC TGACCGTGGC CGAGAACCAG
GCACGGGTCA GCGAGCTGTG GTCGGTCGCC GACGTGGTCC TGGGCGCCGG GGCGTACGTG
CTGGTGTTCT TCCGGCGCCG GTGGCCACTG CCGGTCGCCG TGACGACGGC GCTCGTCGGC
GCGGTCTCCG GTGTCGCCGC GGGGCCGGCC GTGCTCGCGG CCGTGTCCCT GGCCACCCAT
CGCCGGTGGC GCCAGCTCGC GGTCGTCGGC TCGCTGAACT TCGCGGGCGC CCAGCTGTTC
GGCACCCTCA CGGCCTCCGA CGAGGACCCG GCCTGGGTCA TCCTGGTCGC GAACGCCGTC
GCCACCGCGG GCATCCTCGG CTGGGGCATG TACATCGGGT CGCGACGCGA GCTGATCTGG
ACGCTGCGCA GCCGGGCCGA GCGCGCCGAG GCGGAGCAGG AGCTGCGGGT CGCTCAGGCC
CGAAGCAACG AGCAGGCCCG GATCGCGCGC GAGATGCACG ACGTCCTCGC GCACCGCATC
TCCCAGATCT CCATGCACGC GGGCGCCCTC GCGTTCCGCG ACGACCTCAC CGCCGACGAG
ATGCGCTCGA GCGCCGCCGT GATCCAGGAG AAGGCGCACG AGGCGCTCAC CGACCTGCGC
GGAGTGCTCG GCGTGCTGCG CGACGACGCC ACCGGAGAGC GGCTCCGCGC CCCGCAACCG
ACGTACGCCG ACCTCCGCAG CCTGGTCGAC GAGGCGAGCG CGTCCGGCCT CCGGGTGGAT
CTGCAGGACC TGGTGCGCGG TGACCCGCCG GAGGCGGTCG GTCGCACCGT CTACCGGATC
GTGCAGGAGG GCCTGACCAA CGCCCGCAAG CACGCCCCGG GGGCGCTGGT GACCGTCCAG
GTCAGCGGCT CCGCCGAGGA CGGCGTGGAC GTGCTGCTGC GCAATCCACT CGGGTTCGGC
ACGTCCAGCA CCCCCGGCGC GGGCCTGGGG CTCGTGGGTC TCACGGAGCG GGCCGAGCTC
CGGGGCGGCC GGCTCGAGGC CGGCCGGGAC GGCTCGACCT TCGTCCTGCA CGGCTGGATA
CCGTGGGCGG CATGA
 
Protein sequence
MDRPTPEEYQ PRLRAWGHVW RVALMLSISA LSWLTVAENQ ARVSELWSVA DVVLGAGAYV 
LVFFRRRWPL PVAVTTALVG AVSGVAAGPA VLAAVSLATH RRWRQLAVVG SLNFAGAQLF
GTLTASDEDP AWVILVANAV ATAGILGWGM YIGSRRELIW TLRSRAERAE AEQELRVAQA
RSNEQARIAR EMHDVLAHRI SQISMHAGAL AFRDDLTADE MRSSAAVIQE KAHEALTDLR
GVLGVLRDDA TGERLRAPQP TYADLRSLVD EASASGLRVD LQDLVRGDPP EAVGRTVYRI
VQEGLTNARK HAPGALVTVQ VSGSAEDGVD VLLRNPLGFG TSSTPGAGLG LVGLTERAEL
RGGRLEAGRD GSTFVLHGWI PWAA