| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1235 |
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| Symbol | |
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| ID | 4599231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 1311569 |
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| End bp | 1312504 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639775829 |
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| Product | ATP dependent DNA ligase |
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| Protein accession | YP_922436 |
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| Protein GI | 119715471 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | [TIGR02779] DNA polymerase LigD, ligase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.898519 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGTCCA TGCGCCCGAT GCTCGCCACC CATGGTCGGC AGGTCCCGAC GGGGGAGGCC
TGGGCGCACG AGGTGAAGTG GGACGGGGTC CGCGCGCTGA CCGAGGTGCG CGACGGCGCG
CTGCGGATGA CCAGCCGCAA CGAGAACGCG ATCACGATCG CCTGGCCCGA GCTCGCGACC
AGCCCGCTGG GTGATCGCGA CCTGCTCGTG GATGGCGAGA TCATCGCGCT CAACGAGCGC
GGGCTGCCGG ACTTCCGCAC CCTCCAGGAC CGGATGCACG TGCGCAAGGC GGCCACGGCG
GCCCGGCTCT CGCGGGAGGT GCCCGCGACC TACATGGTCT TCGACGTGCT CCGGATCGAC
GGTCGCGACC TGACCGGCGA GCCGCTCGAC GTACGCCGGG AGCTGCTCGC CGGCCTCGGC
CTGGACGGCA CCTGGCAGGT GCCGGGCTCC TACGACGACG GGCCGATGCT GTTCGAGGCC
ACCCTCCAGC AGGGCTTCGA GGGCATCGTC AGCAAGCGCC GCAGCTCCCG CTACGCCTTC
GGCGAGCGTT CGCCGCACTG GCTGAAGTTC GCGCACCGGC ACCGGGTCTC CTACGTGGTG
GGCGGGTGGC GCCCCCAGGA GGGCACCGCC GACCGGCTCG CCTCGCTGCT CGTGGGGGAG
CCGACCGCCG ACGGGCTGCT CTACCGTGGC CGGGTGGGCA GCGGGATCGG GCCGAAGCAG
GGGCGTGCGC TGGCCGAGCT GGTGGCCCGG CTCGGCCGCC CCGCCAGCCC GTTCGCCGAC
GAGGTGCCGC GCGCCGACGC GCAGGGCACC CGCTGGCTGG AGCCGGTCCT GGTCGTGGAC
ATCGACACCC ACGGTCGTGG GTACCAGCGC CTGCGCCAGC CCTCGTTCCA GGGGGTTCGC
TCCGACCTCA CCCCGGAGGA CCTGTGCTCC ACCTGA
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| Protein sequence | MESMRPMLAT HGRQVPTGEA WAHEVKWDGV RALTEVRDGA LRMTSRNENA ITIAWPELAT
SPLGDRDLLV DGEIIALNER GLPDFRTLQD RMHVRKAATA ARLSREVPAT YMVFDVLRID
GRDLTGEPLD VRRELLAGLG LDGTWQVPGS YDDGPMLFEA TLQQGFEGIV SKRRSSRYAF
GERSPHWLKF AHRHRVSYVV GGWRPQEGTA DRLASLLVGE PTADGLLYRG RVGSGIGPKQ
GRALAELVAR LGRPASPFAD EVPRADAQGT RWLEPVLVVD IDTHGRGYQR LRQPSFQGVR
SDLTPEDLCS T
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