| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1227 |
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| Symbol | |
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| ID | 4599276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 1303273 |
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| End bp | 1305132 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639775821 |
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| Product | ABC transporter related |
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| Protein accession | YP_922428 |
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| Protein GI | 119715463 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.141283 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACCG GCCCCGGGAG CAACACCGAC GACGACACCG ACGTCCGGCG CTGGCGGGGC
GTGGCCGAGG TCGACGCCGA CGAGGCGGCG GAGCGGATGA CCGCCGGTCG GCTCGGGGGT
GGCTCCGGAC GGCTGCTGCG CGAGCTGCTG GCGCCGTACC GCCGCGCCAT CCAGGCCCTC
GTGCTGATCG TGGTGGTCGA GAACGCCGCG CGGCTCTCGA TCCCCTACCT GGTCAAGGAG
GGCATCGACA CCGGCATCCC GCCGATCCAG GAGTCCGGCG ACCTCGAGCC CCTGTTCCTC
GTCGTCGGGG CGGTGCTCGT CGCCACGCTG GTGCAGGCCC TCTCGCGCAA CCTGTTCCTC
GTGCGCTCGG GCCGGATCGG CCAGGACGTG CTCTTCGAGG TGCGCCGCCG GGTCTTCCGT
CACTTCCAGG TGCTCAGCCC GGCGTTCCAC GACGGCTACA CCTCCGGGCG GGTGATCTCG
CGGCAGACCT CCGACGTGGA CGCCATCTAC GAGATGCTCG AGACCGGCTT CGACGGCCTG
GTCACCGCCG CGCTCACCCT GGTCGGCACG GCCGGCATCC TGTTGCTCCT CGACGTCAAG
CTCGGACTGG TCGCGCTGCT GTGCGGCCCG TTCCTCGCCT GGTTGACGAA CTGGTTCCGC
AAGGAGTCGG CGCGCAGCTA CCAGGTCACC CGCGAGAAGG TCGCGCTGGT CATCGTCCAC
TTCGTCGAGT CGATGGGCGG CATCCGCGCG GTCCAGGCCT TCCGCCGCGA GCCACGCAAC
CAGGAGATCT TCGACGACGT CAACGACCAG TACCGCGCCG CCAACCTGGT GGCGTTCCGG
CTGGTCGCCT GGTTCATGCC CGGCATCCGC CTGATCGGCA ACGTCACCAT CGCGCTGGTG
CTGCTCTACG GCGGCTACCG CGCCTACCAG GGCGAGGTCA CCGTCGGCGT GCTCGCCGCG
TTCCTGCTGT ACCTGCGGCA GTTCTTCGAG CCGATGATGG AGATCTCGCA GTTCTACAAC
ACCTTCCAGT CCGCGTCGGC CGCGCTCGAC AAGCTCGCCG GCGTGCTGGA CCAGGAGCCC
GGCGTACCCG AACCGCAGCG TCCGCGCGAC CTGCCGGAGG CCCGCGGCGA GCTGCGCTTC
GAGCACGTCG GCTTCGCGTA CGTCGAGGGC CGGCCGGTGC TGCCCGACCT CGACCTCACC
GTGCCCGCCG GGCAGACCCT CGCGCTGGTC GGCACCACCG GCGCCGGCAA GACCACCCTC
GCCAAGCTGG CCACGCGCTT CTACGACCCC ACCTCGGGGC GGGTGCTGCT CGACGGCGTC
GACCTGCGCG AGCTGGCCTC GGACACGCTG CGCGACCGGG TCGTGATGGT CACCCAGGAG
AACTACCTGT TCTCGGGCAG CGTCGCCGAC AACATCCGCT TCGGCCGCCC GACGGCCACC
CGGGAGGAGG TGGTCGCCGC GGCGCGGGCG CTGGGTGCCG ACGACTTCAT CCGGACGCTG
CCCGCGGGCT ACGACACCGA CGTCAGCAAC CGCGGCGGCC GGCTCAGCGC CGGCCAGCGC
CAGCTGGTGG CGTTCGCCCG GGCGTTCCTC GCCGACCCCG CGGTGCTGAT CCTCGACGAG
GCGACCTCCT CGCTGGACAT CCCGAGCGAG CGCCTGGTCC AGCGGGCGCT GCGCACCGTC
CTCGCCGGCC GCACCGCCGT GATCATCGCC CACCGGCTCT CGACCGTGGA GATCGCCGAT
CGGGTGATCG TCATGGAGCA CGGCCGGATC GTCGAGGACG GCTCGCCCGC GGAGCTGGTC
GCCGGCGGGT CGGGCCGCTT CTCCGACCTC CACCGCGCCT GGCTCGACTC GCTCGCGTGA
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| Protein sequence | MTTGPGSNTD DDTDVRRWRG VAEVDADEAA ERMTAGRLGG GSGRLLRELL APYRRAIQAL
VLIVVVENAA RLSIPYLVKE GIDTGIPPIQ ESGDLEPLFL VVGAVLVATL VQALSRNLFL
VRSGRIGQDV LFEVRRRVFR HFQVLSPAFH DGYTSGRVIS RQTSDVDAIY EMLETGFDGL
VTAALTLVGT AGILLLLDVK LGLVALLCGP FLAWLTNWFR KESARSYQVT REKVALVIVH
FVESMGGIRA VQAFRREPRN QEIFDDVNDQ YRAANLVAFR LVAWFMPGIR LIGNVTIALV
LLYGGYRAYQ GEVTVGVLAA FLLYLRQFFE PMMEISQFYN TFQSASAALD KLAGVLDQEP
GVPEPQRPRD LPEARGELRF EHVGFAYVEG RPVLPDLDLT VPAGQTLALV GTTGAGKTTL
AKLATRFYDP TSGRVLLDGV DLRELASDTL RDRVVMVTQE NYLFSGSVAD NIRFGRPTAT
REEVVAAARA LGADDFIRTL PAGYDTDVSN RGGRLSAGQR QLVAFARAFL ADPAVLILDE
ATSSLDIPSE RLVQRALRTV LAGRTAVIIA HRLSTVEIAD RVIVMEHGRI VEDGSPAELV
AGGSGRFSDL HRAWLDSLA
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