Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_1072 |
Symbol | |
ID | 4599552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 1130387 |
End bp | 1132564 |
Gene Length | 2178 bp |
Protein Length | 725 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639775670 |
Product | hypothetical protein |
Protein accession | YP_922277 |
Protein GI | 119715312 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01451] conserved repeat domain |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGACGCA TGTCCAGCAA GCTGCGAATG GGGGGACTAG CGGCGGTGGT CGGTGCGACC ACGCTGGTGT TCCCGCTCCT CGCCATCGGG CCGGCCCAAG CGGCGCCCGC GGCCGACCTG TCGATCGAGA AGACCGTGGC GAGCGTCGCG CCGCCGATCA CCTTCGACCC GGCGTTGCGT GACGTGCGGG CGACCGGCCA CGAGGACTGG ACCCGAGACG GCCTACACAT CTGGACGGAA GACTGGAACT CGACCGACAA GGTCGGCGAG TACGTCGCGA CGTCCAAGCC ACTGGCGACG ATCGGCGAGC CGAGCCTTGC GTACACCACG ATCCTGGGGA CGATCCCGCC GGGCTTCGTG CTCAAGGTCG ATGTCACGGG CGACGGGGTC AGCGACGGCG AGCTGATCGG CGAGTCGACC TTCTACGGCA ACGACTGGTG GCTGAACGAG CCGCTGGGCA ACCCTGGCGA CTTCGGCGCG TTCGTGGCGG GCGCGCCCGT CGTCGGTGGC GGCTCCGGGT CGACCTGGCA CGGCACCTTA GACCAGTGGC GGACCGCATT CCCCACGGCG ACCGTCACAG CTTTCGGCTT CGGACTTGGA TCGGGCGTCT TCGGCGAGGG CTACGTCACC GCGCTGGACT TCGCGGGCAC GCACTACGAC CTGACTCGCG ACTACGAGTC TTCGATCCAG GCGGCGCCCG GTGACACCGT CGAGTACAAG ATCGCGATCG CCAACAACGG CGACGCGGGT GCCAGCAACA TCACGATCAG CGACCTGCTG CCGAGCGACC TGACCTACGT GCCCGGCTCC CTGAGCCGAC CCGACTGGTG CTCGGTCACC GGGCGGACCC TGAGCTGCAC CGGCGGGGTC CTCCCGCCCG GCACGAGCTC CAACGTGTAC CTCCAGGCCA CGATCAGCGA CACGGTGAGC AGCGCCGGCC TGCCGGCGAC GGCCGGCCAC ATCGTCGACG TGCAGAAGCA GGAGGTCTTC GCCGACCTCC CGGCCGGCGC GACCAAGACC TACAGCGTCT TGTGCCCCAC CGGGTACGTG CCGACCGACG GCGGGCTGCT GCTCGACGCG GTGGATCAGG GTGGTGACTA CGCCGACATC GTCGTCGCGA AGAGCAAGCC CACGGTCCAG TCCGGGATCA AGGGCTGGAC GGTGACCGCG AGCAACCTCG GCGAGCAGCG CGGCCAGGGC AAGGTCAAGG TGACCTGCCT GGACGAGACG ATCGGTTCCA GCAACGGTCA CACGCACACG ATCGACCTGA CCGACTCGAC CGCCCAGGGC ACGATCTCCG CCTCATCGCC CGACACCAAC GGCGAGCTGG TGACCGTGTC CTGCTCGACC GGGTACACCC CGATCGCTCC CGAGCACACC GTGACCAGTG GGATCGCCGT GATCCGCTCG TCGTACGCCG ACGCCAACGT GTGGCGCTGG GTGGTCGACC ACGAGGTCGG CACCGCCGCG ACGTTCGACG TCGACTGCCT GGCGCCCGAG ACGGCGTCGA GCAACGGCCA CACCGCGACC CTGCCCCTCA CCACCCAGCA GGACACCATC TCGGTGGGTC CGGAGAGCCG GGACGAGGGC ATCGAGCAGT GCGGGTCGAG CGCCAACGCG ATCACCGGCG GCTACGCCGG CCAGGACGCG AGCGTCCTCT CGCTCGGCAA GGAGCAGCGC GGCAACAACT ACATGTTCCG CTTCTACAAC GAGGACTGGT CGCAGGCGTG GAACGCCGAC ATCCAGGTCA CCTGCGTGGG CGTGCGCACG GCCGACGAGC CGCAGTACTA CCACATCACG AACACCGCGA CGGTGAGCTC GCCCGACGAC CCGACCAACA GCTCGTCGTC GGCCGACATC GCCATCGTCG GCGACGCGGT GCAGCCGGCG GCCGGCGTCT TGGTCGGCCC GAACGGCAAC CGCTCCGGAG ACCCCGGGAG CATCAAGAAG GTCGGCCTGC GCTTCACCTG CACGTCGGCC TGCGCATTCA CCGTCAAGGT GATCAAGGGC GGGAATGTCG TCGCGAAGGC GACCAAGTCG CTGGCGGCAT CCCCCAACGT TCGGTGGGTG TACGTGCCGA CGACCAGTGC CGGCAAGAAC CTCGCTCACA ACGACGTCGT TACCGTCAGG GTGAGGACCT CGACCGCTAC GACCAACACA TCGGTGACTC TGGACTGA
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Protein sequence | MRRMSSKLRM GGLAAVVGAT TLVFPLLAIG PAQAAPAADL SIEKTVASVA PPITFDPALR DVRATGHEDW TRDGLHIWTE DWNSTDKVGE YVATSKPLAT IGEPSLAYTT ILGTIPPGFV LKVDVTGDGV SDGELIGEST FYGNDWWLNE PLGNPGDFGA FVAGAPVVGG GSGSTWHGTL DQWRTAFPTA TVTAFGFGLG SGVFGEGYVT ALDFAGTHYD LTRDYESSIQ AAPGDTVEYK IAIANNGDAG ASNITISDLL PSDLTYVPGS LSRPDWCSVT GRTLSCTGGV LPPGTSSNVY LQATISDTVS SAGLPATAGH IVDVQKQEVF ADLPAGATKT YSVLCPTGYV PTDGGLLLDA VDQGGDYADI VVAKSKPTVQ SGIKGWTVTA SNLGEQRGQG KVKVTCLDET IGSSNGHTHT IDLTDSTAQG TISASSPDTN GELVTVSCST GYTPIAPEHT VTSGIAVIRS SYADANVWRW VVDHEVGTAA TFDVDCLAPE TASSNGHTAT LPLTTQQDTI SVGPESRDEG IEQCGSSANA ITGGYAGQDA SVLSLGKEQR GNNYMFRFYN EDWSQAWNAD IQVTCVGVRT ADEPQYYHIT NTATVSSPDD PTNSSSSADI AIVGDAVQPA AGVLVGPNGN RSGDPGSIKK VGLRFTCTSA CAFTVKVIKG GNVVAKATKS LAASPNVRWV YVPTTSAGKN LAHNDVVTVR VRTSTATTNT SVTLD
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