| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0845 |
|---|
| Symbol | |
|---|
| ID | 4597904 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 883685 |
|---|
| End bp | 884863 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639775446 |
|---|
| Product | mandelate racemase/muconate lactonizing protein |
|---|
| Protein accession | YP_922055 |
|---|
| Protein GI | 119715090 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACCG CCCCAGCACC CGCCGTCAGC GCGGTCCGTG CAGCGAGCAC CCTCAGCGCA
GACGACCTGA CCATCGAGCG GATCGAGGTC ATCCCGATGC GGGTGCCGTT GGCGCGGCTC
TTCCAGGGCT CGCACTACTC GATGTCCACG CGCTGCACGA TCGTCACGCG CCTGCACACG
CGCTGCGGCC TCGTCAGCGA GGTCTACAAC GGCGACACCG ACGCCGAGCA GTCCGTCATC
GTCGGCATCA TCCGCGACGA GATCGTCCCG CAGCTGATCG GCCGCAGCGC CCTGGCCCAC
GAGTCCTGCT GGGAGGCGAT GCTCCCGCCG ACCTATGACA TCCTCCGGGA CCGCTCCGTC
GCGCTCCAGG CGATCGCGTG CCTCGACTCG GCGATCTGGG ACGTCGTCGG CAAGGCCGTC
GGCCTGCCGC TGTTCCAGCT CTGGGGGGGC TACCGCGACC GGCTACCCGC GATCTGCATC
GGCGGGTACT ACAGCGACGA CGAGGCCGAC ATCGGCCGCC AGATCGAGCG CTACCTCGAC
CTCGGGTTCG CGGGGTGCAA GTTCAAGGTC GGCCGCCTCA CCCCGGCCGA GGACGCACAC
CGGACCCGCC TGGCCCGCAA GGCCGCCGGC GACGACTTCG TGCTGATGGT CGACGCCAAC
CAGGGCTTCA CCCGCCGGGG CGCGATCGAG TTCGCCGGAC TGACCGAGGA CCTCGACCTG
CGCTGGTTCG AGGAGCCGGT CGGTTGGGTC AACGACCGGC TCTCCATGCG CGACGTGCGC
CTCACCACCG GGATCCAGGT GGTGGCCGGC CAGAGCGAGG ACACCCGGGC CGGGCTCCGC
GACCTCATCA CCGCGGGAGC GGTGGACGCG TGCAACGCCG ACGCCAGCTG GATCGGTGGT
CCGAGCGAGT GGCGCCGCGT CGCCGCGCTC GCCTCGATGT ACGAGGTCGA CATGGCACAC
CACGAGGAGC CGCAGATCTC CGCCCACCTC CTGGCGTCGA TCCCGCACGG CACCTACCTC
GAGACCTTCG ACCCCGACCG CGACCCGATC TTCTGGAACA TGATCGCGAA CCGGCGTCCC
TTCCAGGACG GGGACTACCT GGTGCCGGAG GGACCGGGAT TCGGCCTCGA GCTGGACTGG
GACTACATCG AGCGATACCG CTCGGATCCG GCGTCGTGA
|
|---|
| Protein sequence | MSTAPAPAVS AVRAASTLSA DDLTIERIEV IPMRVPLARL FQGSHYSMST RCTIVTRLHT
RCGLVSEVYN GDTDAEQSVI VGIIRDEIVP QLIGRSALAH ESCWEAMLPP TYDILRDRSV
ALQAIACLDS AIWDVVGKAV GLPLFQLWGG YRDRLPAICI GGYYSDDEAD IGRQIERYLD
LGFAGCKFKV GRLTPAEDAH RTRLARKAAG DDFVLMVDAN QGFTRRGAIE FAGLTEDLDL
RWFEEPVGWV NDRLSMRDVR LTTGIQVVAG QSEDTRAGLR DLITAGAVDA CNADASWIGG
PSEWRRVAAL ASMYEVDMAH HEEPQISAHL LASIPHGTYL ETFDPDRDPI FWNMIANRRP
FQDGDYLVPE GPGFGLELDW DYIERYRSDP AS
|
|---|
| |