| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0775 |
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| Symbol | |
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| ID | 4598855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 818332 |
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| End bp | 819936 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639775376 |
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| Product | alpha amylase, catalytic region |
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| Protein accession | YP_921987 |
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| Protein GI | 119715022 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTGA ACGATCAAAC CCACGGTGCG GGACCGGAGT GGTGGCGGCA CGCGGTGACC
TACCAGATCT ACGTCCGCAG CTTCGCGGAC GCCGACGGCG ACGGCATCGG CGACCTGTCC
GGGATCACCG CGCGCCTCGA GCACGTCCGC GACCTGGGCG TCGACGCGAT CTGGCTGAAC
CCGTTCTACG TGTCCCCCCA GCGCGACGCC GGGTACGACG TCGCCGACTA CTGCGACATC
GACCCGCTGT TCGGCACGCT GGCCGACGCC GACGCCATGG TCGAGCGCGC ACACGAGTTG
GGCCTGCGGG TGATCGTCGA CCTGGTCCCC AACCACACCT CCAGCGAGCA CGCGTGGTTC
CAGAAGGCCC TCGCCGCCGG CCCGGGCAGC CCCGAGCGCG ACCGCTACCT GTTCCGCGAC
AGCCCGGACG GGCCGCCGAA CAACTGGAAG TCCGTCTTCG GCGGGCCCGC GTGGACCCAG
GTGGCGGACG GCCAGTGGTA CCTCCATCTC TTCGACTCCA CCCAGCCGGA CCTGAACTGG
CGCAACCCCG AGGTCGGCGA CATGTTCGTC GACGTGCTGC GGTTCTGGTT GGACCGCGGT
GTCGACGGCT TCCGCGTCGA CGTCGCCCAC GGGCTGTTCA AGGAGGAGAC CCTGCGCGAC
CAGGTGGTCC CCGAGGGAGT CGAGTCCGCG ACCGGGGCGT CCGCCGGCGA GTCCGGGGGC
GAGTCGATGG TCGAGCGCAC CGAGGCCGAC GAGCCGATGT GGGACCAGCC CGAGGTGCAC
GAGGTCTACC GGCGTTGGCA CGAGGTGCTC GCGAAGTACG ACGGCGACCG GATGATGGTC
GCCGAGGCCT GGACCCAGAG CCCCGAGTCG ATGGCCCGCT ACATCCGCGC CGACGAGTTC
AGCCAGGCCT TCAACTTCGC CTGGCTGCTG GCACCCTGGT CGGCGAAGGC GTTCGCCGAG
GTGATCACCG GGACCTTCGA GGCCGTCGAC CAGGTCGACG CCTCCCCCAC GTGGGTGCTC
TCCAACCACG ACGTCGACCG GCACCCGAGC CGGTACGGCG GTGGCGCGAC CGGGCTGGCC
CGCGCCCGGG CGGCCACCCT CACCATGCTG GCGCTGCCGG GCTCGGCGTA CCTCTATCAG
GGCGAGGAGC TCGGCCTGGA GCAGGTCGAG GTCGAGCCGG AGTTCCGGCA GGACCCGCTG
TGGTTCCGCA CCGGCAATCC CGGCCGGGAC GGCTGCCGGG TGCCGATGCC GTGGAGCGGC
GCGGAGCCGC CGTTCGGGTT CGGGCCCGGC GCCGGCCAGC CGTGGATCCC GCAGCCGGCC
GAGTGGTCGG GGCTCACCGT CGAGGCCCAG ACCGCCGACC CCGTGTCCAC GCTCTCGTTC
TATCGGGCGG CGCTGGCGGC CCGGCGTACC TTCTCGGAGA CCGCGGGCGA GGAGGTCGAG
ATGGTCGAGG CCGGGACGGA CGTGCTGTCC TTCCGCCGCG GCCCGATCAC CGTCGTGCTC
AACTGCAGCA CCGAGGCCGT CGGGCTGCCG GCCGGCGAGG TGCTGATGGC CAGCGGGCCG
GTGAACGGGA GCCTGCCCCC GGACACCGCA GTCTGGCTGC GCTGA
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| Protein sequence | MDLNDQTHGA GPEWWRHAVT YQIYVRSFAD ADGDGIGDLS GITARLEHVR DLGVDAIWLN
PFYVSPQRDA GYDVADYCDI DPLFGTLADA DAMVERAHEL GLRVIVDLVP NHTSSEHAWF
QKALAAGPGS PERDRYLFRD SPDGPPNNWK SVFGGPAWTQ VADGQWYLHL FDSTQPDLNW
RNPEVGDMFV DVLRFWLDRG VDGFRVDVAH GLFKEETLRD QVVPEGVESA TGASAGESGG
ESMVERTEAD EPMWDQPEVH EVYRRWHEVL AKYDGDRMMV AEAWTQSPES MARYIRADEF
SQAFNFAWLL APWSAKAFAE VITGTFEAVD QVDASPTWVL SNHDVDRHPS RYGGGATGLA
RARAATLTML ALPGSAYLYQ GEELGLEQVE VEPEFRQDPL WFRTGNPGRD GCRVPMPWSG
AEPPFGFGPG AGQPWIPQPA EWSGLTVEAQ TADPVSTLSF YRAALAARRT FSETAGEEVE
MVEAGTDVLS FRRGPITVVL NCSTEAVGLP AGEVLMASGP VNGSLPPDTA VWLR
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