Gene Noca_0454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0454 
Symbol 
ID4597353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp483963 
End bp484736 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content71% 
IMG OID639775068 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_921683 
Protein GI119714718 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1174] ABC-type proline/glycine betaine transport systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTCGA TGACGGTCCT CGCCGACGCG TGGGACTACC TGACGACGGC GGGGAGCTGG 
ACCGGCGACG GCGGCATGGT CGAGCTGCTG CTCCAGCAGC TGCTGCTGAG CTTCACCTCC
TTGGCGCTGG CGGCCGCGGT CGGCCTGCCG GTCGCGCTCT GGCTGGGTCA TCTCGGGCGC
GGCGGCTTCC TCGCGATCAA CGTGACGAAC ATCGGACGCG CCGTACCCAC CTTCGCGCTG
CTCGCCCTGC TCGTCACCGC TGATTGGCCC GGCACCGGCA CCCTCGGACC GTACGGGCGG
GCGGGACTCG CGACGATCAT CGCGCTCACC CTGTTCGCCC TGCCCCCGAT CATCACCAGC
TCGTACGTCG GTGTCCGCGA GGTCTCGCCC GCGGTCAAGC AGGCCGCCGA CGGCATGGGG
ATGACCGGGC GCCAGAGGTT CTTCCGGGTC GAGCTCCCCC TGGCGGCCCC GCTGGTGCTG
CTCGGCCTGC GCCTGGCCCT CGTGCAGGTC TGGGCCACGG CCACCATCGC GGCGCTGGTC
GCCGGCCCGG GGCTCGGTCG CGTCATCACC GACGGGTTCT ATCGCACCAA CTACGGCAAG
GGGGTGGCGG GAGCCGTGGT GGTCGCGGTC GTCGCGCTCC TGCTCGAGCT GCTGGCCGCC
CTCGGGCAGC GGGTGCTCGA CCCGACGGCC CGAGCCTCGT CACCGAAACG TCACCAGGGA
ATGTCGGTGG ACGCACCTAG AGTTACCGAA GCAGCCGACG CCGTCGGTCG TTAG
 
Protein sequence
MTSMTVLADA WDYLTTAGSW TGDGGMVELL LQQLLLSFTS LALAAAVGLP VALWLGHLGR 
GGFLAINVTN IGRAVPTFAL LALLVTADWP GTGTLGPYGR AGLATIIALT LFALPPIITS
SYVGVREVSP AVKQAADGMG MTGRQRFFRV ELPLAAPLVL LGLRLALVQV WATATIAALV
AGPGLGRVIT DGFYRTNYGK GVAGAVVVAV VALLLELLAA LGQRVLDPTA RASSPKRHQG
MSVDAPRVTE AADAVGR