Gene Noca_0353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0353 
Symbol 
ID4595647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand+ 
Start bp379296 
End bp379673 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content71% 
IMG OID639774968 
Productassimilatory nitrite reductase (NAD(P)H) small subunit 
Protein accessionYP_921584 
Protein GI119714619 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID[TIGR02378] nitrite reductase [NAD(P)H], small subunit 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCACGT CGACCGGGCC CGCCGCGGGG GCGACGTACA CGACCGTCTG CGGGCTCGAC 
CAGATCGAGG TCGAGGGCGG CGTCGTGGCG CTCGTCGACG GCGTCGCGGT CGCAATCTTC 
CGGACACACG ACGGAAACGT CTACGCGATC TCCAACTACG ACCCTGTCTC CAGGGCGTCG 
GTGCTCGCCC GCGGAATCGT CGGCACACGT GGCGACGTCC CCGTGGTCGC CTCGCCGATG 
CACAAGCAGG CCTACGACCT GCGCACCGGG CAGTGCCTCG ACGACGCGGC GGTCCGGGTC 
CCGACGTACG ACGTCCGGGT GATCGACGGC ACCGTGCACG TCGGCGGTCC CCGACCGGAG 
CACCAGGACA GCACGTGA
 
Protein sequence
MSTSTGPAAG ATYTTVCGLD QIEVEGGVVA LVDGVAVAIF RTHDGNVYAI SNYDPVSRAS 
VLARGIVGTR GDVPVVASPM HKQAYDLRTG QCLDDAAVRV PTYDVRVIDG TVHVGGPRPE 
HQDST