Gene Noca_0330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0330 
Symbol 
ID4597967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp354203 
End bp354976 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content72% 
IMG OID639774945 
Product3-oxoacid CoA-transferase, A subunit 
Protein accessionYP_921561 
Protein GI119714596 
COG category[I] Lipid transport and metabolism 
COG ID[COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit 
TIGRFAM ID[TIGR02429] 3-oxoacid CoA-transferase, A subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACAAGG TGGTGGCGTC GGCGACAGCC GCGGTGGCGG ACATCCCGGA CGGGGTGACG 
CTGTCCGTCG GTGGGTTCGG GTTGTGCGGG ATCCCCTCGG TGCTGATCCA GGCGGTGCTC
GACCGCGGCA CCCAGGACCT GGAGGTGGTC TCGAACAACG CCGGCGTGGA CGGGTGGGGC
CTGGGCCTGC TCCTCGGCGC CGGGCGGCTG CGGCGGGTGG TGGCGTCGTA CGTCGGGGAG
AACAAGGAGT TCGCCCGCCA GTACCTCTCC GGCGAGCTGG AGGTGGAGCT GACCCCGCAG
GGCACGCTCG CGGAGCGGAT GCGTGCCGGC GGGTCGGGGA TCCCGGCGTT CTTCACCGCG
ACCGGCGTGG GCACCCAGGT GGCCGAGGGC GGGCTGCCGT GGCGCTACGA CGCCGAGGGG
GCGGTGGTGA AGTCCTCGCC GGCCAAGCAG ACCCAGGTCT TCGAGACCGC GGAGGGGCCC
AAGGAGTTCG TGCTCGAGCA CGCGATCGTC GCGGACTTCG GCCTGGTGCG GGCCTGGAAG
GGCGACCGCC ACGGCAACCT GGTGTTCCGC GACTCGGCTC GCAACTTCAA CCCGTTGGCG
GCGATGTGCG GGCGGGTCAC GATCGCGGAG GTCGAGCACC TGGTCGAGCC GGGTGAGCTC
GACCCCAACC AGGTGCACAC CCCGGGGGTG TTCGTGCAGC GGGTGGTGGA GCTGACCCCG
GAGCAGGCCG CGGACAAGCG GATCGAGAAG AAGACGGTGA GGGCACGCGG ATGA
 
Protein sequence
MDKVVASATA AVADIPDGVT LSVGGFGLCG IPSVLIQAVL DRGTQDLEVV SNNAGVDGWG 
LGLLLGAGRL RRVVASYVGE NKEFARQYLS GELEVELTPQ GTLAERMRAG GSGIPAFFTA
TGVGTQVAEG GLPWRYDAEG AVVKSSPAKQ TQVFETAEGP KEFVLEHAIV ADFGLVRAWK
GDRHGNLVFR DSARNFNPLA AMCGRVTIAE VEHLVEPGEL DPNQVHTPGV FVQRVVELTP
EQAADKRIEK KTVRARG