Gene Noca_0247 details

Gene Information

• Locus tag: Noca_0247
• ID: 4596131
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: -
• Start bp: 259106
• End bp: 260992
• Gene Length: 1887 bp
• Protein Length: 628 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 639774860
• Product: ATPase domain-containing protein
• Protein accession: YP_921479
• Protein GI: 119714514
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG0642] Signal transduction histidine kinase

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGACCACCA GCCCGACGGC GGAGGGCATA CTCGGGGAGC GGGCCCGGCG GGAGGCCGGC 
CCGCGGCTCG GCGGGAGGGC GGAGACGGTG GTCGACACCG AGGTGGTGCA CCACGAGGAC 
GCACGGGCCG GGTGGTCGGA CTCCGCCGCC CGGGCGGTGC TCCAGCTGAT GGTGGAGTCG 
GTCGCCGAGA TGGTCGGCTT CGAGGTGGCG ACGCTCTCGG TGGTGCTCGA CGGCGACCTG 
GTCACGATGG CCTACACCGG CCCCGAGGAG TTCCGCGACT ACCTGATGGC CCCGGACCCG 
GTCACCGTCC TCGACCCGGT GCTCGCCCGG GCGGAGAGCT GGGGCCGCTT CCACTTCCTC 
GCCGCCGAGG ACTACGACGC CACCACCTTG GAGGGTCACT GGATGGTGGT CGCCGACGGG 
CAGGTCGACG TGCCGGACGC CTGGCACCCG ATGGACGTCC TGGTCGGGCT GCTCACCGAC 
GACGACGGGC GGCTGGTCGG CGCGATGTCG GTGGACCGCC CGGTCTCCGG CCGGCGACCG 
GACCCGGCCC AACGGCGGCT CCTGGAGCGG TACGCCGCGC AGGCCGAGCG CGCGGTGATG 
ACGGCCTTCG AGCGGGAGGA GCTGGTGCAG CAGGTCGCGC ACTCGGAGGC GGCGCGACGG 
CTGATCCGGT CCGCCTCGAT GCCGGACCAA GCCTCGCTGC AGGCGGTGCT GGACCACACC 
CACCGGCCGC TCGTGGAGGG CTTCGGCGCC GCTGGCTCGT GGCTCCAGGT CCTCGACCCG 
GACAGCGGCG GCGTCGGCTA CGCCCGGACC CGCGAGGGTG AGGTGGTCTC CCTGTCCGAC 
CGGATGATCG CCCTGGCGCA CGGGCTGGCA CCCCGGCTGT GGGAGGCCCA GCAGGTGCTG 
GTCGTCGCCG AGGGTGTCGA ACCGTCGCTG TCCGCGGAGT CCGGCGCCGG GCCACTTCTC 
GAGGAGGCGC GCCGCCAGAT CGCCGAGCTC GGCCTGACCT CCGCGATGGC CGTCCCGCTC 
GGCGCCGGCA CCGAGTGCCT CGGGTTCCTC GTGCTGTCCC GGCGCGCCCA GGACCCGCCC 
TGGTCGACCG TCGAGATCGG GTCGGCACTG CAGATCGGGT ACGACCTCGG CGCCGCGCTG 
ATGACCGTGC GCGCGCTCGA GCGCGAGCGC AGCCTGGTGC GCGAGCTGCA GCAGCTCGAC 
GACTACCGGA GCCAGCTGAT CGCCACGCTC TCCCACGAGC TGCGCACCCC GCTCACCGTC 
ATCTCCGGCA ACCTGGAGCT GCTTGGCGAC CTCTCCCTCG ACGAGACCGC CCAGCACTAC 
CAGGAGGCGA TGACCCGGGG CACCACCCGG ATGCAGAAGG TCGTCGACGA CCTGCTCCTC 
CTGGCGCGGG TGAGCGACCC GCAGCACCCG CTGGTACAGG TCCCGGTCGA CCTGAACGCG 
GTGACCCGCA CGACCGTCGA CCTGCTGACC GCACCGGCAC TGGCCAAGGG CCTGTCCCTG 
CGCCTGCAGC ACAATCCCCG CGAGCACCTG GTGCCGGGCG ATCCCGGCGA GCTCGACCGG 
TTGCTGACGA ACCTGGTCAG CAACGCGGTC AAGTACACGC CCGCCGGCGG CACCGTCACG 
GTCACGGTGG AGCGCCGTGG GGACGCCGCG GTGCTGGAGG TCGCCGACGA CGGGCTGGGG 
ATCTCCGAGG AGGACCAGGT CGGGCTGTTC CGCCCGTTCT TCCGCACGAC GAACCCCGAC 
GCGCTGCGCG AGCCGGGCAC CGGGCTGGGC CTGGCGATCG TGGCCACCAT CGTCGAGCGG 
CACGGAGGCG AGGTGCGGGT GCGCTCGCGC CTGGGTGTGG GGACCACCTT CACGGTCACG 
TTCCCCGCAG CGGCGCCGGC CGGCTGA 

 

Protein sequence

MTTSPTAEGI LGERARREAG PRLGGRAETV VDTEVVHHED ARAGWSDSAA RAVLQLMVES 
VAEMVGFEVA TLSVVLDGDL VTMAYTGPEE FRDYLMAPDP VTVLDPVLAR AESWGRFHFL 
AAEDYDATTL EGHWMVVADG QVDVPDAWHP MDVLVGLLTD DDGRLVGAMS VDRPVSGRRP 
DPAQRRLLER YAAQAERAVM TAFEREELVQ QVAHSEAARR LIRSASMPDQ ASLQAVLDHT 
HRPLVEGFGA AGSWLQVLDP DSGGVGYART REGEVVSLSD RMIALAHGLA PRLWEAQQVL 
VVAEGVEPSL SAESGAGPLL EEARRQIAEL GLTSAMAVPL GAGTECLGFL VLSRRAQDPP 
WSTVEIGSAL QIGYDLGAAL MTVRALERER SLVRELQQLD DYRSQLIATL SHELRTPLTV 
ISGNLELLGD LSLDETAQHY QEAMTRGTTR MQKVVDDLLL LARVSDPQHP LVQVPVDLNA 
VTRTTVDLLT APALAKGLSL RLQHNPREHL VPGDPGELDR LLTNLVSNAV KYTPAGGTVT 
VTVERRGDAA VLEVADDGLG ISEEDQVGLF RPFFRTTNPD ALREPGTGLG LAIVATIVER 
HGGEVRVRSR LGVGTTFTVT FPAAAPAG