Gene Noc_2954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2954 
Symbol 
ID3706436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp3341148 
End bp3341540 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content51% 
IMG OID637739430 
Producthypothetical protein 
Protein accessionYP_344928 
Protein GI77166403 
COG category[R] General function prediction only 
COG ID[COG3631] Ketosteroid isomerase-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAACA ATTTAGATAT TATACGTAGC TTGTACAAGG CATTTGCTAT TGGTGACATC 
CCTGCGGTTC TGGCAGTATT TTCTCCAGAC ATGCATTGGA CCGAGGCTGA AGGCGGGCCT
TACGGCGGCG TCTTTATCGG ACCGGATGCA GTCTTGGAGA ATGTCTTTAT GAAGCTCTGC
GGAGAGTGGA ATGGCTTCGC TGCAGTGCCT AGGGAGTTTG TGGCAGACGG TTCCACCGTC
GTAGCACTTG GCGAGTACAG TGGCTCCTAC AAGGCTACGG GTAAAAGCTT CAAAGCCCCG
TTCGCCCATG TCTGGAAGTT TGAGGATGGA AAAGTGGTCT CGTTTCACCA GTACACAGAC
ACGGTTGTCC ATCAGCGTCC ATTGCAGGCT TAA
 
Protein sequence
MSNNLDIIRS LYKAFAIGDI PAVLAVFSPD MHWTEAEGGP YGGVFIGPDA VLENVFMKLC 
GEWNGFAAVP REFVADGSTV VALGEYSGSY KATGKSFKAP FAHVWKFEDG KVVSFHQYTD
TVVHQRPLQA