Gene Noc_2900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2900 
Symbol 
ID3707455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand+ 
Start bp3280063 
End bp3280653 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content46% 
IMG OID637739377 
Productelectron transport protein SCO1/SenC 
Protein accessionYP_344876 
Protein GI77166351 
COG category[R] General function prediction only 
COG ID[COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.028081 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAATC GTGCTTTATG TAATCTTGCT GCTATCATGA TGCTTTTGCT GCTTGCCCCC 
ACTAAGTTAA TAGCCTCAAC CATCGTGCTG AAGCACGTCG CGCCTTTGCA AAAAGAAACG 
ATAGCCCACT TAAACCAAGG AAGTAAAAGC GACAGTGGGC AATGGAGGCT GGTTGTTTTT 
GGCTTTACCA ACTGTAGCGA TGTCTGCCCC ATGTCGCTTG CAAATCTTTC CATGCTAATG 
GGCGCTGCGG AGGAAGAAAA TATTAAACTG GCAGGGACTT TTGTAACCAT CGATCCTGAT 
AGGGACACCC ATGCAGTATT AGCCGAGTAC ACTGATAAAT TTAATGCCGA TATTGCCTAT 
CTACGCCTAA CAGGCAAAGA CCTGGAACAC CTTAAAAGCA CCTTTGGCGT GGAAACTGTT 
TTCTATACCA AAAATGCGGG CAACAGAATT CACTACCAGG TTGATCACAG TAGCACCGGT 
TTTCTCATCG ATCCCGAAGG AAGAATTAGA GTTCTGTTCG ATGCGGTGGA AGACGCTGTC 
GATATTGCTA ACATGATCCA TGAGCAAGGG ACGCTTTTTA GCCATGAGTA A
 
Protein sequence
MRNRALCNLA AIMMLLLLAP TKLIASTIVL KHVAPLQKET IAHLNQGSKS DSGQWRLVVF 
GFTNCSDVCP MSLANLSMLM GAAEEENIKL AGTFVTIDPD RDTHAVLAEY TDKFNADIAY 
LRLTGKDLEH LKSTFGVETV FYTKNAGNRI HYQVDHSSTG FLIDPEGRIR VLFDAVEDAV 
DIANMIHEQG TLFSHE