Gene Noc_2807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2807 
Symbol 
ID3705287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand- 
Start bp3181262 
End bp3182275 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content50% 
IMG OID637739283 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_344784 
Protein GI77166259 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0308213 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGATTA AAGTCGCAAT TAATGGTTAC GGTCGTATTG GCCGCAATGT TTTGCGGGCT 
TTGTATGAGC ATAACCGCAA CAGCGAGATC CAGATTGTTG CCATTAACGA TCTAGGAGAT 
GCTAATACCA ATGCCTATTT AACCCAGTAT GACACTGTAC ACGGTAAATT TCCGGGAGAG 
GTTTCCGTCG ATGGCGACTA CTTGATCGTC AATGGTGACA AAATTCGTGT GCTGGCCGAA 
AGGGACCCGG CTAAATTACC CTGGGATCAA CTAGGCGTGG ATGTAGTGCA CGAATGTACG 
GGGTTATTCA CTAGCAAGGG AAAAGCCTCA GCCCACCTTC AAGCGGGGGC TAAAAAAGTA 
ATTATTTCGG CCCCGGGGGG CGGGGACGTT GACGCCACTA TTGTCTACGG TGTCAATCAT 
GATTCTCTAA AAGCTTCCCA TACTGTCATT TCCAACGCCT CTTGTACCAC CAATTGCTTG 
GCACCGCTGG TAAAGGTGCT CCAAGATAAT ATTGGGGTTG AGCATGGTTT GATGACGACA 
GTCCACTCCT ATACCAACGA TCAGGTACTG ACGGACGTTT ATCATACGGA TCTTCGCCGG 
GCCCGGTCCG CCACTCAGTC GATGATCCCC ACCAAAACGG GTGCAGCCGC AGCGGTTGGG 
CTAGTATTGC CGGAACTTAA TGGCAAGCTG GATGGTTTTG CGATTCGAGT ACCGACCATC 
AACGTTTCCC TAGTGGATCT TACTTTCGTG GCCTCCCGCA ATACCACCAA AGAAAACGTT 
GACGGGATGA TGCGAGAAGC CTCTGAGGGT GACTTGCAGG GGGTGCTTGC TTACAATGAC 
AAACCGCTTG TCTCCATGGA CTTCAATCAT GATCCTTCAT CTTCTGTTTA TGAGGCTAGC 
TTGACCAAGG TAATGGAAGG CAATTTGGTC AAAGTTTTGG CGTGGTATGA CAATGAATGG 
GGCTTCTCCA ATCGCATGTT GGATGCCACT GTGGCCCTAA TGAATGCCAA GTAA
 
Protein sequence
MAIKVAINGY GRIGRNVLRA LYEHNRNSEI QIVAINDLGD ANTNAYLTQY DTVHGKFPGE 
VSVDGDYLIV NGDKIRVLAE RDPAKLPWDQ LGVDVVHECT GLFTSKGKAS AHLQAGAKKV 
IISAPGGGDV DATIVYGVNH DSLKASHTVI SNASCTTNCL APLVKVLQDN IGVEHGLMTT 
VHSYTNDQVL TDVYHTDLRR ARSATQSMIP TKTGAAAAVG LVLPELNGKL DGFAIRVPTI 
NVSLVDLTFV ASRNTTKENV DGMMREASEG DLQGVLAYND KPLVSMDFNH DPSSSVYEAS 
LTKVMEGNLV KVLAWYDNEW GFSNRMLDAT VALMNAK