Gene Noc_2784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2784 
Symbol 
ID3705514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand- 
Start bp3159652 
End bp3160119 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content49% 
IMG OID637739260 
ProductABC-type transport system involved in resistance to organic solvents periplasmic component 
Protein accessionYP_344761 
Protein GI77166236 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.162084 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACAGT CTCGAACGGT AGAATTGGTT GTGGGCCTAT TTGTGGCCGC TGGTTTGGTG 
GCATTTTTTA TGCTGGCTAT GCGGGTAAGT AATTTAAGCT TGGTGGCGCA AGAGAACACT 
TATTCCGTAG TGGCGGAATT CCAGAATATT GGAGGTCTTA AGGTGCGTTC TCCGGTGACC 
TTGGCTGGGG TCACTATCGG CCGGGTAGTG TCTATCCAAA TAGATCCCCA AACCTATGGA 
GCCCAGGTGA GAATGCATAT TGAAGCTCAG TATGATTATC TGCCTGAGGA TACCTCGGCC 
AGCATCTATA CTTCTGGATT GTTGGGCGAG CAATATATTG CCTTGGAGCC AGGAGGAGCC 
GAGGCCTATC TTAAAGAAGG CGGTGAAATC ACGCTTACCC AATCCGCTCT GGTGCTTGAG 
GAGCTTATCG GTCAATTTCT CTATAGCAAG GCTGCTGGAG AGTCTTAG
 
Protein sequence
MRQSRTVELV VGLFVAAGLV AFFMLAMRVS NLSLVAQENT YSVVAEFQNI GGLKVRSPVT 
LAGVTIGRVV SIQIDPQTYG AQVRMHIEAQ YDYLPEDTSA SIYTSGLLGE QYIALEPGGA 
EAYLKEGGEI TLTQSALVLE ELIGQFLYSK AAGES