Gene Noc_2776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2776 
Symbol 
ID3705506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp3152595 
End bp3153473 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content60% 
IMG OID637739252 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_344753 
Protein GI77166228 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTTCCA CCCCTTCTAG AATGCCCGCC TTCATTGTTG GCTTCGGTGA CATAGGCCAG 
CGAGTCGCAG CCTTGTGGCA GCGCGATGGA AGCGAAGTGA CGGCCCTGAT CCGAACCCCT
CGCGACACGG CAGGGTGCTG CGCCATTCCT GGCGATCTAG ACCAGCCGGA GACTTTGCAT
GACATGCCCC AGAAACCAGC ACTCCTGTTT CATTTTGCTC CGCCTGCTCC TTCTGGAGCT
TCCGATGCTC GAACGGGCCA CCTACTCAAA GTCCTGGAGA AGGCGCCTCC CCAGCGCATC
GTCTATATTT CCACCTCGGG TGTTTATGGC GACTGCGGGG GCGCCTGGGT AGATGAGTCT
CGCCCAGTCC ATCCCGGTAA TGATCGCTCC CGCCGCCGGG TCGATGCCGA ACAGCAACTC
AGGCTCTTCG CCCGCCGTTA CGCCCTCCCC CTCATCATCC TGCGTGTACC AGGAATTTAT
GGCTCCGGCC GCCTGCCACT AGAGCGCCTG CGCCGGGGTA ATCCGGTCGT CTGTCCAGAC
CAGGCGCCGT GGAGCAACCG CATTCATGCC GACGATCTGG CCACCATTGC CGTGCGTGCG
GGCCAAAGCA GCATACCTGC AGGCATCTAC AACGTCAGCG ACGATGAACC TACCAGCATG
ACGGACTATC TCTACCGTCT AGCCGACGCA GCGGGCTTAC CCCGCCCACC CTGTGTCAGT
CTGGCCGAGG CACGGCGGAA TTTCTCCCCG AAGCTGCTGG AGTACTTAAA TGAGTCCCGC
CGCTTAAACA ACCAGAAGAT GAAAACGGTA CTCGGCGTAA AACTCCGCTA TCCGACGTTA
GAGACGGGGC TACCCGCCGC TCTTGGGATT TCTAAATAA
 
Protein sequence
MVSTPSRMPA FIVGFGDIGQ RVAALWQRDG SEVTALIRTP RDTAGCCAIP GDLDQPETLH 
DMPQKPALLF HFAPPAPSGA SDARTGHLLK VLEKAPPQRI VYISTSGVYG DCGGAWVDES
RPVHPGNDRS RRRVDAEQQL RLFARRYALP LIILRVPGIY GSGRLPLERL RRGNPVVCPD
QAPWSNRIHA DDLATIAVRA GQSSIPAGIY NVSDDEPTSM TDYLYRLADA AGLPRPPCVS
LAEARRNFSP KLLEYLNESR RLNNQKMKTV LGVKLRYPTL ETGLPAALGI SK