| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2754 |
|---|
| Symbol | |
|---|
| ID | 3705292 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | + |
|---|
| Start bp | 3126233 |
|---|
| End bp | 3127306 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637739232 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_344733 |
|---|
| Protein GI | 77166208 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02566] CRISPR-associated protein, Csy3 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.180685 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACTG TTCAGCTTCC CTCATTACTC AACTATACCC GCAGCATTGT TCCCAGCGAA
GGCACCTTCT GGGTGGCCAA TGCCGATAAC CGGCCATTGC TTATCCAGGA TAAAACCTTA
TTAGGCACCA TCGCCAACTA CAGCTCAGTC TACAAAAAAG ATAAACAGCG TGATGAAGGC
GCTATTGAAA AGGAAATGAT GGCCGGCGAC AACAATATTC AACGAGTGGA TAGCTGTCAT
CTGCCCGCCG ATGCGGATAC TTTTGAGCTT CGTTTTACGC TTAAATTTTT GGCGAATGCC
AACGGCCCTG AAGCCTGCGA AGGTGCTGAA TTTCGAGAAG ACCTGGAAAG CATAGCGCAA
GCGTACGCTG AAAAAGGCGG TTTTACCCTA CTGGCCGAGC GTTATTTGGC TAATCTTCTA
AATGGGCGGT TTTTATGGCG CAATCGTTAT GGCGTCCAGC GTCAAATCAC CCTGCGTGCG
CCCTATAACG AGCTCAAAGA AAAAACCTTT GAGATTATTG ACCGTGCGGA ACCCACTCTG
CCGCAAGTAC GGATGGATGA GCTCAAACCT TGGATTGATC ATATTGCCAG CGCACTCAGC
GGTAAAACCT CTTTTTTCCT TATGGAAGTC AGCGCTAGGG TAACCATTGG CCTCGGGCAA
GAAGTGTACC CCAGTCAGGA ATTTGTTGAT AAGGATTCGC GGGGGCAAGG GAAAAAGTCC
AAGACCCTAT TTTTTGTGCA AGTCGCCGAT CAACAGGTCG CTGCCATGCA TAGTCAAAAA
ATCGGTAACG CTATCCGTAC CATTGATAAT TGGTATCCGG ACGCCAATGC GGATCGTCCG
CTGGCGGTTG ATCCCTTTAC CGTCGATAAG CGCCGAGCCC GTGCCGTGCG GTTGCCGGAT
CATGGAAAAT CGGACTTCTA TAGTCTTTTA AAAAATTTAC CCGCTCTAAA AGATGATATC
GAGCATGCGC CGAACGCTGA AGCCATACCC GGTCAAGCCC ATTATTTTAT GGCCGTGTTA
ATACGCGGGG GGGTGTTTAG CGGAGAGAAA AAAGCAGAGA AGAAAGCCAA GTAG
|
|---|
| Protein sequence | MATVQLPSLL NYTRSIVPSE GTFWVANADN RPLLIQDKTL LGTIANYSSV YKKDKQRDEG
AIEKEMMAGD NNIQRVDSCH LPADADTFEL RFTLKFLANA NGPEACEGAE FREDLESIAQ
AYAEKGGFTL LAERYLANLL NGRFLWRNRY GVQRQITLRA PYNELKEKTF EIIDRAEPTL
PQVRMDELKP WIDHIASALS GKTSFFLMEV SARVTIGLGQ EVYPSQEFVD KDSRGQGKKS
KTLFFVQVAD QQVAAMHSQK IGNAIRTIDN WYPDANADRP LAVDPFTVDK RRARAVRLPD
HGKSDFYSLL KNLPALKDDI EHAPNAEAIP GQAHYFMAVL IRGGVFSGEK KAEKKAK
|
|---|
| |