Gene Noc_2753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2753 
Symbol 
ID3705291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp3125281 
End bp3126210 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content54% 
IMG OID637739231 
Producthypothetical protein 
Protein accessionYP_344732 
Protein GI77166207 
COG category 
COG ID 
TIGRFAM ID[TIGR02565] CRISPR-associated protein, Csy2 family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0773972 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTCTT ATTATCTTCT CTTACCCACC TTACATGTGA CTGGCTGCAA CTGGGAAAGT 
AGCCACCTCA CCCGTTCATT GCCCTTAACC GCCATGGCGG GTTTTGCCGA TTATTTGGTG
TATTTCGAGC TTGCCGACAA CGCGGCGGAG GCTGGCGCCG ATTTGAAAGG CTTCGCGGTC
TGCCTCCATG ACGGGCAAAT CCATGAAGGC TTGAGCAAAA ATCCCCTTGC CTTGTGCAAG
GGCAATGGGC TCAGTCAAGC CCGGGATGAT TTGCTTAACC CGCCTCTCCT TCCAGAGGTC
AAGGGTTCTC TGTCCCTTAG TTTGGTGGTG GCTTTGGAGC TAGAAGATAA ATCCGCCTTG
GATGAGTGGC TGAAAAACCG CGCAACGGCA TTTTTACAGA CTCGTCGTTT AGCAGGGGGG
GATATTATTG GAATAGGTCA ACCAAAAATT TACAGCAAAA GATCCGAACT AGCCAGAGAA
ATGGGGCGGC TGCCGCCTGG CTGGTTTATT GGTAATGGCG CTGAGTTCAT TAGCAATGCG
CCTGATCCCT TTGCGGCCCT AATCAATGCC ACGGCTTGGT TTCCGGTGGA GGATAAAGAA
CCCCAAACTA CATCCGCTCA CCCTTCCCCC TCCAAGCGGC GCCAGCATCC TCGCCATTGG
CTCTATGCCA CCTGCGTCGG CTACCAACTC CTGGAATCAC CCCAACCGCG CCGTAACCGC
AGCCATGGGT CTTCAGATAC CAATTCTGCC ACGAATCATG CCTACGCCGA ACCTGTACAC
AGTCTGGCTG AGTTGGTCTG GGCACGAAAG TTGTTACAGC CCCAGGATGA TTCCACGACC
GACAACTGGC TCACGGAGAA CAATCTACTA TGGCGCTGGG AAACCGACCC CCCTAGCCGC
ACAGTTTATC TTTCAACGCA AGCGCTTTAA
 
Protein sequence
MSSYYLLLPT LHVTGCNWES SHLTRSLPLT AMAGFADYLV YFELADNAAE AGADLKGFAV 
CLHDGQIHEG LSKNPLALCK GNGLSQARDD LLNPPLLPEV KGSLSLSLVV ALELEDKSAL
DEWLKNRATA FLQTRRLAGG DIIGIGQPKI YSKRSELARE MGRLPPGWFI GNGAEFISNA
PDPFAALINA TAWFPVEDKE PQTTSAHPSP SKRRQHPRHW LYATCVGYQL LESPQPRRNR
SHGSSDTNSA TNHAYAEPVH SLAELVWARK LLQPQDDSTT DNWLTENNLL WRWETDPPSR
TVYLSTQAL