Gene Noc_2556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2556 
Symbol 
ID3704559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand- 
Start bp2907553 
End bp2908158 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content47% 
IMG OID637739035 
ProductNADH-ubiquinone/plastoquinone oxidoreductase, chain 6 
Protein accessionYP_344539 
Protein GI77166014 
COG category[C] Energy production and conversion 
COG ID[COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.166333 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAGA CTCTCTTTTA TATCTTTGCT GCCATCTTGC TGTTTGCGGC AACTATGGTG 
GTTACTGTAC GTAACCCTGT GCGGGCAGCC TTATTTTTGG TTTTGGCTTT TTTTACCAGC 
GCTGCTATCT GGCTTTTGCT GGAAGCTGAG TTTCTAGCGA TTGTTCTGGT ATTGGTTTAT 
ATCGGTGCGG TCATGGTGTT GTTCCTGTTT GTGGTAATGA TGTTGGATAT GAATCTGGCG 
CCACTGCAGG AAGGATTTGC TCGATACTTG CCCGTTGGGT TCCTGGTAGC AGTGCTCATT 
GCCATTGAAA TGATAATTGT GCTAGGAAGC AAAAACTTTG GTCTTGACCA ATTCACTGCC 
CCTGCTTCCC GCGGGGCTGA TTACAGCAAC ACAAAAGAGT TGGGAAATTT ACTCTATACC 
GTTTACGTTT ATCCTTTCGA ATTAGCTTCA GTCATTCTTC TAGTCGCTAT TGTCGCGGCC 
ATTGCTTTAG CATTGCGGCG TCGCCCCAGT AAAGCTCAAG ATCCTGCGCA ACAGGTGCGG 
GTACGGCCTC AAGATCGGGT TAGATTGGTT AAGATGGCCG CCGAGAAGTC CCAAAAAACA 
AACTAA
 
Protein sequence
MEKTLFYIFA AILLFAATMV VTVRNPVRAA LFLVLAFFTS AAIWLLLEAE FLAIVLVLVY 
IGAVMVLFLF VVMMLDMNLA PLQEGFARYL PVGFLVAVLI AIEMIIVLGS KNFGLDQFTA 
PASRGADYSN TKELGNLLYT VYVYPFELAS VILLVAIVAA IALALRRRPS KAQDPAQQVR 
VRPQDRVRLV KMAAEKSQKT N