| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2509 |
|---|
| Symbol | |
|---|
| ID | 3704704 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 2856661 |
|---|
| End bp | 2858592 |
|---|
| Gene Length | 1932 bp |
|---|
| Protein Length | 643 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637738988 |
|---|
| Product | PrkA serine kinase |
|---|
| Protein accession | YP_344492 |
|---|
| Protein GI | 77165967 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2766] Putative Ser protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00245056 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCCGATA CAAAAAATGG ATTTACTGAA ATTATTCAAA AGGACCGGGC GAGGCGAGAG
CGCCAAGAAT GGCGGGGAAC GTTTGTTGAT TACTTAGAAA AAGTCAAAAA GGAGCCCCTA
CTTGCTAGGT TAGCCCATTC CCGAGTTTAC GACATGATCA TGCGGAAGGG GGCCGAAGAT
ATCAATGCCG CGGATGACCC TCATGTCAAG CGCCTCTACG GAGATGAGCC GATTAAAGTA
TATTCTTTTT TCAAGGATGA ATTCTTTGGT ATTGAACGGA CTCTAGCTCA ATTGGTGCGT
TATTTTCATT CCGCATCCCT GCATGGAGAG GAGAGTCGGC AAGTTCTCTA CCTGATGGGT
CCCGTGGGGG CCGGTAAGAG TTCTCTTATC GAACGCTTGC ATCGGGGTTT GGAGAATGTG
GAGCCTATTT ATGCCATTGA AGGCTGTCCC ATGCGGGAGG AACCCTTGCA TCTCCTACCG
CGCCATTTAC GTAAGGAATT TGAAAAGATG CTGGATGTGC ATATTGAGGG TGATTTATGC
CCGGTATGCC GTTTTCGTCT CAAAGAAGAG TTTGATGGCC GTTATGAAGA CGTGCCTGTT
ATCACGGTAG ATTTTTCCAA GCGGGATCGC CGGGGTATTG GCGTTGTACC GCCGGTGGAC
CCCAATAACC AGGATACCTC AGTGTTAATT GGATCAGAGG ATATCTCCAA ATTGGATCTG
TATTCCGAAG GCGATCCTCG GGTATTGGAT CTAAATGGCG CTTTCAACGT GGGCAACCGG
GGCGTGGTGG AATTTATTGA GGTCTTTAAG AACGAGACGG AATATCTCCA TTCCATGATT
ACCGCGACCC AGGAGAAATT TGTCCCTGCT CCCGGCCGCC ACGGTACTGT ATATGTGGAT
ACCTGTATCG TTGCTCATTC TAATGAGGCC GAATGGCAGA AATTCAAAGC CGACCATACT
AACGAGGCTA TTCTCGATCG GATCGTCGTG GTTAAAGTGC CCTATAATTT ACGCCTATCA
GAAGAAATCA AGATCTACGG GAAACTTTTA CATCATTCTG ATTTTCGGGC GCATATTGCG
CCCCACACTC TTGAAGTGGC TTCTATGTTT GCGATTTTGT CCCGCCTAGA GCCTACCCCT
AAATGTGACT TAATAACCAA ACTGCGGCTT TATAATGGCG AGGAGGTGGT AGAGAAGGGG
TCAACGCTCA AGATCAATGC TAAAGAGCTC CAGGAGGCAG CTTCACGGGA AGGGATGTTT
GGCATTTCGA CCCGCTTTAT TATGAAGGCC CTAGACAATG CCTTGGCGGA TAGCGAAGAG
GGGATCAATC CTATCAATGT CCGCGAAGCC TTGATTGTGA TGGTCAAACA ATCGGAGCTG
GCGGACGATA CCCGGAAGCA CTATCTGGAG TTGCTCCAAG ATACCTTGCA CAAGGTCTAT
CTTGAAATCC TAGAAAAAGA AATTACCAAA GCTTTTGTCT ATTCCTATGA GGAACAGGCA
GAAACCTTAT TTCAAAATTA TCTGGATCAT GCTGAGGCCT ATGTGAACAA GACTCGGGTT
AAAGATTGGG ATACGCGGGA GGAATTACAG CCCGATGAAA ATTTTCTGAA GTCAGTTGAA
GAGCAAATCG CTATCGTCGG TAGCGCTGCT GATGGTTTCC GGCAAGAAGT GATTGCCTTT
CTTTGGGCGG CTACCCGCCG TGGCGAGAAG GTAAGCTATC AATCCTATGA GCCTTTAAAG
GAAGCGATAG AGAAGAAATT GACCAGTTCG GTACGGGATT TAAGCCGTAT TATTACCAAA
TCTCGTACCC GAGATGAGGA GCAGGCCAAG AAGTACGATG ATTTGGTTAA GAATCTCCTG
GAGCGGGGCT ATAACGAGCA CTCAGCAGAG GTGGTGTTGA AATATGCCGC AAATAATCTT
TGGAAGGATT AG
|
|---|
| Protein sequence | MADTKNGFTE IIQKDRARRE RQEWRGTFVD YLEKVKKEPL LARLAHSRVY DMIMRKGAED
INAADDPHVK RLYGDEPIKV YSFFKDEFFG IERTLAQLVR YFHSASLHGE ESRQVLYLMG
PVGAGKSSLI ERLHRGLENV EPIYAIEGCP MREEPLHLLP RHLRKEFEKM LDVHIEGDLC
PVCRFRLKEE FDGRYEDVPV ITVDFSKRDR RGIGVVPPVD PNNQDTSVLI GSEDISKLDL
YSEGDPRVLD LNGAFNVGNR GVVEFIEVFK NETEYLHSMI TATQEKFVPA PGRHGTVYVD
TCIVAHSNEA EWQKFKADHT NEAILDRIVV VKVPYNLRLS EEIKIYGKLL HHSDFRAHIA
PHTLEVASMF AILSRLEPTP KCDLITKLRL YNGEEVVEKG STLKINAKEL QEAASREGMF
GISTRFIMKA LDNALADSEE GINPINVREA LIVMVKQSEL ADDTRKHYLE LLQDTLHKVY
LEILEKEITK AFVYSYEEQA ETLFQNYLDH AEAYVNKTRV KDWDTREELQ PDENFLKSVE
EQIAIVGSAA DGFRQEVIAF LWAATRRGEK VSYQSYEPLK EAIEKKLTSS VRDLSRIITK
SRTRDEEQAK KYDDLVKNLL ERGYNEHSAE VVLKYAANNL WKD
|
|---|
| |