Gene Noc_2413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2413 
Symbol 
ID3704982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2759703 
End bp2760527 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content67% 
IMG OID637738895 
Productextradiol ring-cleavage dioxygenase III subunit B 
Protein accessionYP_344400 
Protein GI77165875 
COG category[S] Function unknown 
COG ID[COG3384] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGAAA ACCGCTTGCC GAGCCTGTTT ATCCCCCACG GGGCCGGGCC GTGTTTTTTC 
ATGGACTGGA ATCCCCCGGG GACCTGGGAG CGGATGGAAG CCTGGCTGCG AGGCCTCACG
GGCCAGGTGG GCGCAACACC GAAGGCCCTG CTGGTGGTCT CCGCCCACTG GGAAGCCGCG
GTCTTCACGG TCAATGCCCA GGCCCAGCCC GGCCTGCTCT ACGACTATAA TGGCTTCCCC
GCGCATACCT ACCGCCTCAC CTGGCCAGCG CCGGGTGCTC CTGCGCTGGC CGCGGAGGTT
GGCGCGCTGC TGGCGGCGGA GGGCTTTACG GTGGCCGAAG ACCATGAGCG GGGCCTGGAT
CACGGGGTGT TTATCCCCAT GAAGCTGGCC TTCCCGGAGG CCGAGGTGCC GGTGGTGCAG
CTTTCGCTAC GATCGGGCCT GGACCCCACC GAGCACCTCA AGGCAGGCCA GGCCTTGGCG
CCCCTTCGCC GCCAGGGGGT GTTGATCGTC GGCAGCGGCA TGAGCTATCA CAACATGGCG
CAATTGCGCC ACGGCGGCCC TGCCATCGAT CCCGCCTCGC AGCATTTCGA TGCCTGGCTG
GCGGAAACCG TGGCCTTACC GCCCGGGCAG CGGGAACCAC GGCTCACCGA GTGGTCCCGT
GCGCCCGGCG CACGGGACTC CCATCCACGG GAGGAGCATC TCTTACCCTT GCATGTCGTC
GCTGGCGCGG CGGATGGGGG CCCAGGGTTG AAAGTGTTCG AGGACCAGGT GCTCGGCAGT
GTGCAATCCG CCTTTCTTTT CGGGGATTCG TCTCCCCCTC CATAA
 
Protein sequence
MSENRLPSLF IPHGAGPCFF MDWNPPGTWE RMEAWLRGLT GQVGATPKAL LVVSAHWEAA 
VFTVNAQAQP GLLYDYNGFP AHTYRLTWPA PGAPALAAEV GALLAAEGFT VAEDHERGLD
HGVFIPMKLA FPEAEVPVVQ LSLRSGLDPT EHLKAGQALA PLRRQGVLIV GSGMSYHNMA
QLRHGGPAID PASQHFDAWL AETVALPPGQ REPRLTEWSR APGARDSHPR EEHLLPLHVV
AGAADGGPGL KVFEDQVLGS VQSAFLFGDS SPPP