Gene Noc_2271 details

Gene Information

• Locus tag: Noc_2271
• ID: 3705063
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosococcus oceani ATCC 19707
• Kingdom: Bacteria
• Replicon accession: NC_007484
• Strand: +
• Start bp: 2618406
• End bp: 2618954
• Gene Length: 549 bp
• Protein Length: 182 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 637738750
• Product: Type IV fimbrial biogenesis protein PilV
• Protein accession: YP_344259
• Protein GI: 77165734
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG4967] Tfp pilus assembly protein PilV
• TIGRFAM ID: [TIGR02523] type IV pilus modification protein PilV; [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACTACA GCTCCGAGTT TCCATGCTTG CGCCCCCAGC CAAAAGGTTT CTCCTTGCTC 
GAAGTCCTTG TTTCCGTGGC CGTCCTCTCC ATTGGCCTGC TCGGGCTAGC GGGGCTTCAA 
ACCACCGGTA TACGCCACAA CCACAGTGCT TATTTACGTA GCCAGGCGAC CCTCTTGGCC 
TATGACATCA CTGACCGGAT GCGGGCCAAC CGCACCGCCG CCCTGAATGG CGGCTATACG 
CTGGATCTGG GCACCCCCCC CGTAACCCCG GCCAAAAATT GTAACGCAGC GACCTGCGAA 
CCCGGCGAGC TGGCGGCCTA TGACCTTTAC TCGTGGTTCC AGAATGTCAC GGCCGTCCTG 
CCGTCCGGTG ACAGCAAAAT CGAATTAAAT TCAGGCGTCG TCACTGTCAC GCTGCAATGG 
GATGAGAAGT GGACTCAACG GCACAAGCCT AAAAAAAATG ACGGGGATGA CGATGACGGG 
GATGACGGAA ACAACAACTC CCCACCCCCC TCGTTTACCA AGCGAATTGT AATGAGTACC 
GAGCTATGA 

 

Protein sequence

MNYSSEFPCL RPQPKGFSLL EVLVSVAVLS IGLLGLAGLQ TTGIRHNHSA YLRSQATLLA 
YDITDRMRAN RTAALNGGYT LDLGTPPVTP AKNCNAATCE PGELAAYDLY SWFQNVTAVL 
PSGDSKIELN SGVVTVTLQW DEKWTQRHKP KKNDGDDDDG DDGNNNSPPP SFTKRIVMST 
EL