Gene Noc_2184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2184 
Symbol 
ID3705220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2524296 
End bp2525099 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content57% 
IMG OID637738660 
ProductABC transporter, inner membrane subunit 
Protein accessionYP_344174 
Protein GI77165649 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGGCG CGTGGCTGCC CATGGGGATT TTGCTGGCAT GGGCGGCACT TGCCTTACTA 
GGGCCTTGGT GGGGGCTGAA ACCTAATGCT ATCCACTTAG AAAGGATATT AAATCCTCCC
TGTCCGGAAT CCTGGTTGGG TTTCGATGAT TTGGGACGGC CCTTGTGGGA TCGCTTGGTC
GTTGGCGCTC GGACCTCTTT TCTAGTAGCG GTAGGTGTGG TGGCTACCGC TGGATTTCTC
GGCACCTTGG TGGGGACGTT AAGCGGCTAT TTAGGAGGCT GGTGGGATCA TGGGATCGCT
CGGATAATGG ACATTTTTCT AGCATTCCCT GGTATCTTGC TGGCTATTGC CCTGGCAGGC
ATTCTAGGGC CGGGAATTGA GAATGTGGTA TTTGCCTTGG CCGCGGTGGG GTGGGTTGGT
TACGCGCGCC TGGCACGGGC GCAGGTGCTG AGTCTTCGGC ACCATGAACA TATACAAGCG
GCGATTGCCC TGGGAAGCGG AATCCCGCGC ATTGTGGGGC GGCATTTGCT ACCTTTGATT
CTGGCGCCGC TGATTGTGGA GGCCACCTTT GGGGTGGCAG GAGTGGTCGT GGCGGAAGCG
GGGCTGTCTT TCCTTGGACT GGGAGTACAG CCGCCCGCGG CTTCTTGGGG CAGTATGATC
CGGGATGGAA CCCGTTATCT TCTGGTCGCC CCCCATATGG TATTGGCTCC AGGAATAGCG
CTGATGCTGG TGGTGCTGGC CATCAATCTC CTGGGGGATT GGCTGCGGGA TCGGCTGGAT
GTAAGACAGT CAAGGAGAAA ATAG
 
Protein sequence
MKGAWLPMGI LLAWAALALL GPWWGLKPNA IHLERILNPP CPESWLGFDD LGRPLWDRLV 
VGARTSFLVA VGVVATAGFL GTLVGTLSGY LGGWWDHGIA RIMDIFLAFP GILLAIALAG
ILGPGIENVV FALAAVGWVG YARLARAQVL SLRHHEHIQA AIALGSGIPR IVGRHLLPLI
LAPLIVEATF GVAGVVVAEA GLSFLGLGVQ PPAASWGSMI RDGTRYLLVA PHMVLAPGIA
LMLVVLAINL LGDWLRDRLD VRQSRRK