Gene Noc_2117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2117 
Symbol 
ID3704427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2439108 
End bp2439377 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content47% 
IMG OID637738592 
Productribosomal protein S15 
Protein accessionYP_344107 
Protein GI77165582 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0184] Ribosomal protein S15P/S13E 
TIGRFAM ID[TIGR00952] ribosomal protein S15, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0620683 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCTTAA GCAGTGAAAG AAAAGTACAA GTTATCAAGG AACATCAATG CTCTGTTAAT 
GACACGGGTT CACCGGAAGT GCAGGTCGCC CTGCTTTCGG AACGCATCAC TCAGCTGTCC
GGTCATTTTA AGCAACACAC CCATGATCAT CATTCGCGCC AGGGGTTGCT GCGGGCTGTG
GGGCAACGTC GTAAGCTATT GGACTACTTG AAGAAAAAAG ATTTAGATCG TTATCGTACT
TTAATTAACA AGCTTGGATT GCGCCGCTAG
 
Protein sequence
MSLSSERKVQ VIKEHQCSVN DTGSPEVQVA LLSERITQLS GHFKQHTHDH HSRQGLLRAV 
GQRRKLLDYL KKKDLDRYRT LINKLGLRR