Gene Noc_2026 details

Gene Information

• Locus tag: Noc_2026
• Symbol: nrdR
• ID: 3705177
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosococcus oceani ATCC 19707
• Kingdom: Bacteria
• Replicon accession: NC_007484
• Strand: -
• Start bp: 2338195
• End bp: 2338719
• Gene Length: 525 bp
• Protein Length: 174 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 637738502
• Product: transcriptional regulator NrdR
• Protein accession: YP_344017
• Protein GI: 77165492
• COG category: [K] Transcription
• COG ID: [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains
• TIGRFAM ID: [TIGR00244] transcriptional regulator NrdR

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATTGTC CATTCTGCGG GGCGGGAGAT ACTAAAGTCA CCGACTCCCG TCTAGCAAAT 
GAGGGCGAGG CCATCCGCCG CCGCCGAGAA TGTCAAGGGT GTGGTGAGCG TTTTACCACC 
TATGAAGCTG CAGACCTGGT TTTGCCCCGA TTACTCAAAC GCAACGGTAC GCGGGAACCC 
TTTCAGGAAG AAAAGCTTCG GGCCGGTATC CTGCGGGCGG TGGAAAAACG TCCTGTCAGC 
ACGGAGGCGG TGGAGGCCGC CATTCGCCGG ATTGTCCATC GCTTGCGGGC GAGCGGCGAG 
CGGGAATTCG ACTCCCAGGT GCTTGGGGAG TGGGTCATGG ATGAGCTGCG CCACCTGGAT 
GAGGTAGCTT ATGTCCGCTT TGCTTCCGTT TACCGCCGTT TTCAAGACGT GCAAGCTTTT 
CGGGAAGAAA TCGAACGCTT AGAACGAGCG CTTTCGCTGG AAGAAAGGGC CGCCCAGCTA 
TCTTTACTGC TTGATGGAGG ATCTTTGGTT AATAAATCGA ACTGA 

 

Protein sequence

MHCPFCGAGD TKVTDSRLAN EGEAIRRRRE CQGCGERFTT YEAADLVLPR LLKRNGTREP 
FQEEKLRAGI LRAVEKRPVS TEAVEAAIRR IVHRLRASGE REFDSQVLGE WVMDELRHLD 
EVAYVRFASV YRRFQDVQAF REEIERLERA LSLEERAAQL SLLLDGGSLV NKSN