| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1981 |
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| Symbol | |
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| ID | 3705440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 2275700 |
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| End bp | 2276551 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637738457 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_343973 |
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| Protein GI | 77165448 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | [TIGR03006] polysaccharide deactylase family protein, PEP-CTERM locus subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAGCAGC CAGAGCCAAT CACTAATGCC ATGACTGTGG ATGTGGAAGA TTATTTCCAG
GTATCCGCCT TTGAAAATAT TATTGCACGA GGCGGTTGGG ATAAGTTGCC TTGCCGGGTT
GAGCAAAATA CTGATCGGAT ACTGCAGCTT TTTGCTGATC GGGAGATATC TGCTACTTTT
TTTATGCTAG GTTGGGTGGC AGAGCGCTAC CCAACCCTTA TACAGCGTAT CGTGGAAGCG
GGCCATGAGC TTGCTTCCCA TGGTTTCTCT CACATACGAG TAACACAACA AAATAGAGAC
GACTTTCGTG AGGATGTATC CCGTACCCGT AAATTACTAG AAGATCTCTC AGGCACCGCT
GTGAGGGGTT ATCGGGCGGC AAGTTATTCC ATCGGCAGAA GCAACCTGTG GGCGCATGAG
GTGCTTGCTG AAACAGGTTA TCTTTATAGT TCGAGCATTT ATCCGATACA TCACGATCTA
TACGGCATGC CCGAAGCGCC CCGCTTTGCG TTTTATCCTC CAGCAGCCCC CTCTCTTCTC
GAAATTCCGG TAAGCACCGT CGAGTTATCG GGGCACAAAT TCCCCTGCGG CGGTGGTGGG
TATTTTCGCC TTTTTCCTTA TGGTTTATTT CGCTGGGCAG TACGCCGGGT TAACCAGCTT
GATGGCCAGC CCTGCATTTT TTATTTCCAT CCTTGGGAGA TAGATCCTGA ACAGCCGCGC
CAGCGGGGGA TCAGCATGAA AACACGTGTT CGTCACTATC TTAATCTCCA ACATATGGAG
CAACGATTAT TATGGCTAAT AGGCGATTTC CGTTGGGATC GCATGGATCG CGTTTTTTTG
CAGCAAGATT AA
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| Protein sequence | MKQPEPITNA MTVDVEDYFQ VSAFENIIAR GGWDKLPCRV EQNTDRILQL FADREISATF
FMLGWVAERY PTLIQRIVEA GHELASHGFS HIRVTQQNRD DFREDVSRTR KLLEDLSGTA
VRGYRAASYS IGRSNLWAHE VLAETGYLYS SSIYPIHHDL YGMPEAPRFA FYPPAAPSLL
EIPVSTVELS GHKFPCGGGG YFRLFPYGLF RWAVRRVNQL DGQPCIFYFH PWEIDPEQPR
QRGISMKTRV RHYLNLQHME QRLLWLIGDF RWDRMDRVFL QQD
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