| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1956 |
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| Symbol | |
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| ID | 3704970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 2241402 |
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| End bp | 2243018 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637738432 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_343948 |
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| Protein GI | 77165423 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | [TIGR01733] amino acid adenylation domain
[TIGR03098] acyl-CoA ligase (AMP-forming), exosortase system type 1 associated |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.536259 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAGAA TCCATTCAGC AAATTCCTTA GTACACTCTT TAGTACTCGA TAACGCCCTC
AAGGGCCCGG ATGCGTCAGC ACTCGTGCAT GGTGACCAAA CTCTAACTTA CGCCTCCCTC
GGTGAAACGG TCGAAGCCTG CGCTCGTGGG CTTCTAGCGC TTGGACTTGC TTCCTCCGAG
CGCGTTGCCA TATATTTGCC CAAACGCCCC GAAACGGTAG TTACCCTCTT CGGCGCTGCA
GCCGCCGGCG GCGTATTTGT ACCTATCAAT CCTTTGCTCA AACCCCGGCA AGTTGCTCAC
ATCCTTCGAG ATTGCAATGT CCGGGTACTC GTCACCGCCA GCAACCGTAT TGATTTTTTA
CAAGATGCGC TTGCTGAATG CCACGATCTG CGAAGCCTCG TCATTGTGGA TGCCCCGACT
CAGACGATTG AAAAATTAGC GCAGCCAATG GCTATCTCCT GGGAGCGTCT CTTATCACTG
GGAACTACTC AACAATCCCC AGGGCATCGC CGTATTGACA GTGATATGGC TGCCATCCTC
TACACTTCTG GAAGCACGGG ACGCCCTAAA GGCGTGGTGC TTTCCCATCG AAATTTAGTC
GCAGGTGCGC AAAGCGTAGC CCAGTATCTG GAAAATAATT CCAACGATCG TCTACTCGCG
GTATTGCCCT TAAGCTTCGA CGCCGGCTTT AGCCAGCTCA CGACCGCCTT TTCTGTCGGC
GCAAGCGTAG TACTAATGGA ATATCTGCTG CCAAAAGATG TCATTAAAAG CATCACTCGC
CATGGGATCA CAGGGATAAC TGCCGTACCC CCCCTCTGGG TCCAACTTGC CTCCCTTGCC
TGGCCCCCCG AAGCCGCGGA TACTCTGCGG TATATTGCCA ATACCGGAGG CCGAATGCCC
AAAGCAGCCA CGACAGCCTT GAGACGATCT TTGCCTCAAA CCAAAGTATT TCTGATGTAT
GGACTCACAG AAGCATTCCG CTCCACCTAC CTTCCTCCTG AAGAAGTTGA TAAACGCCCC
GATTCCATTG GCAAAGCCAT CCCCAACGTA GAAATCCAAG TAGCCCGCGA GGATGGCAGC
CTATGCCTGC CTGGGGAATC AGGAGAGTTG GTACACCGGG GTGTCCTGGT AGCCATGGGT
TACTGGAACG ATCCTAAAAA AACGGCGGAA CGCTTCCGTC CTACTCCAGG GCAACCCCCT
GAACTTCCTC TCACCGAGAT AGCGGTATGG TCCGGTGATA CAGTACGTAT GGATGAGGAC
GGTTTCTTCT ACTTCATCGG CCGCCAAGAC GAGATGATCA AAACCTCCGG CTACCGGGTA
AGCCCAACCG AAGTAGAAGA AGTCCTGTAC CAAGCAGGGC TTGTAGCTGA AGCTGCAGTC
GTGGGTGTGC TCCATCCAAA ACTTGGCCAA GGGATCGTCG CCATAGTAAA ACCAAACAAG
GATAATTTTG ATCCTGAGGA TTTATTGGCT ACTTGTCGCG CCGAACTTCC GAATTTTATG
GTTCCTCTTG CCGTGATAGT TTCCGAGAAT CTACCCCGAA ACACGAATGG TAAGATTGAC
CGGCGCGCAC TCGCCATGGA ATTCGAACTT CTATTCAAGG AACAAACCGC CCCATGA
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| Protein sequence | MSRIHSANSL VHSLVLDNAL KGPDASALVH GDQTLTYASL GETVEACARG LLALGLASSE
RVAIYLPKRP ETVVTLFGAA AAGGVFVPIN PLLKPRQVAH ILRDCNVRVL VTASNRIDFL
QDALAECHDL RSLVIVDAPT QTIEKLAQPM AISWERLLSL GTTQQSPGHR RIDSDMAAIL
YTSGSTGRPK GVVLSHRNLV AGAQSVAQYL ENNSNDRLLA VLPLSFDAGF SQLTTAFSVG
ASVVLMEYLL PKDVIKSITR HGITGITAVP PLWVQLASLA WPPEAADTLR YIANTGGRMP
KAATTALRRS LPQTKVFLMY GLTEAFRSTY LPPEEVDKRP DSIGKAIPNV EIQVAREDGS
LCLPGESGEL VHRGVLVAMG YWNDPKKTAE RFRPTPGQPP ELPLTEIAVW SGDTVRMDED
GFFYFIGRQD EMIKTSGYRV SPTEVEEVLY QAGLVAEAAV VGVLHPKLGQ GIVAIVKPNK
DNFDPEDLLA TCRAELPNFM VPLAVIVSEN LPRNTNGKID RRALAMEFEL LFKEQTAP
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