Gene Noc_1946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1946 
Symbol 
ID3704960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2231107 
End bp2231430 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content47% 
IMG OID637738422 
Producttransposase IS200 
Protein accessionYP_343938 
Protein GI77165413 
COG category[L] Replication, recombination and repair 
COG ID[COG1943] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGACT ACAAGCGTCT GACCCATACG AAATGGGGCT GCAAATACCA TGTAGTTTTT 
ATTCCTAAGA AGAGACGGGA GTGGATTTAC GGCAACTTAC GGAAATATTG GGGAGAGATT
TTTCGCGCGT TAGCCACTCG CAGAAGGGTG GAGATTGTAG AGGGGCCTTT GATGAGAGAC
CATGTTCATA TTTGCCTCAA TATACCTCCA AAGTATTCGG TTTCTCAGGT GGTGGGCTAT
CTCAAGGGTA AGAGTGCCAT TGCGATAGCG AGAAGGTTTC GTGGAAAGCA AAGGAAGTTC
AATGGGGAAC ATTTCTGGGC ATGA
 
Protein sequence
MPDYKRLTHT KWGCKYHVVF IPKKRREWIY GNLRKYWGEI FRALATRRRV EIVEGPLMRD 
HVHICLNIPP KYSVSQVVGY LKGKSAIAIA RRFRGKQRKF NGEHFWA