Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_1946 |
Symbol | |
ID | 3704960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 2231107 |
End bp | 2231430 |
Gene Length | 324 bp |
Protein Length | 107 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637738422 |
Product | transposase IS200 |
Protein accession | YP_343938 |
Protein GI | 77165413 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1943] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAGACT ACAAGCGTCT GACCCATACG AAATGGGGCT GCAAATACCA TGTAGTTTTT ATTCCTAAGA AGAGACGGGA GTGGATTTAC GGCAACTTAC GGAAATATTG GGGAGAGATT TTTCGCGCGT TAGCCACTCG CAGAAGGGTG GAGATTGTAG AGGGGCCTTT GATGAGAGAC CATGTTCATA TTTGCCTCAA TATACCTCCA AAGTATTCGG TTTCTCAGGT GGTGGGCTAT CTCAAGGGTA AGAGTGCCAT TGCGATAGCG AGAAGGTTTC GTGGAAAGCA AAGGAAGTTC AATGGGGAAC ATTTCTGGGC ATGA
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Protein sequence | MPDYKRLTHT KWGCKYHVVF IPKKRREWIY GNLRKYWGEI FRALATRRRV EIVEGPLMRD HVHICLNIPP KYSVSQVVGY LKGKSAIAIA RRFRGKQRKF NGEHFWA
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