Gene Noc_1910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1910 
Symbol 
ID3705542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2185044 
End bp2186189 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content50% 
IMG OID637738388 
Productpermease YjgP/YjgQ 
Protein accessionYP_343904 
Protein GI77165379 
COG category[R] General function prediction only 
COG ID[COG0795] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAAGC TTTTGATTGT AGATCGTTAT ATTCTCAAGG AATTGAGTCT CAATGCGACA 
GCAATTACTT TGGTTTTGTT GCTTATTTTT GGTGGAATTC GCTTCATTCG TTTTCTAAGT
CAGGCTACCG AAGGGAAGGT TCCAGGAGAA GCCATTTTAG CGCTTTCCGG ATATGAGGCG
ATAGGCGCTT TGGTATTGCT TTTGCCGTTA GCTTCTTTTC TAGCGGTGCT TCTGGCTCTA
GGCCGGATGG GAGCTGACAA TGAGGTAATT GCCTTGTTTG CCTGTGGCGT AAGCCGGGGT
CATTTGTTGC GGGTGGTGTT GACCTTTGGG CTAGCGCTAG CCATTGGAGT AGGTGGTATT
TCTTTGTATT TGGGGCCAGC AGCATCGGCG GAGGGATATC GCCTTAAACA GCAGGCTTTG
CTTGCTGCTG AAACGAGCGG GCTCGTGGCG GGAAACTTCA AGGAAGCCCA GCATGGGCAA
CGGGTATTTT ATGCTGAAAG CCTAACGGAA GATGGGCTAG GAATGAAAAA TGTTTTTATT
CAGGTGTGGG AGCCCACTCA GAAAACTCTT TTACGGGCGG CGAGAGGGCA CCTTCAAACG
GATGAAGCAA CCGGCGATAA GTATTTGATA TTAGAGGACG GCTATCGTTA TGAGCTGATG
GGCGAGGAGG TTGGAGTTCG CATTTTTAGT TTTGAGCGCC ATGGCATCCT GGTTAAGAAA
GGGGGCGCGC AAGAGTTCCG AATTCGCCAT CAAACTCTTC CCACTTTAAC CCTTTGGGAA
ATGGGCGCCC CCAAGGATAT AGCAGAAGTA CAGTGGCGAA TCTCGATGCC TATTATCACT
TTATTATTAG TGATGCTGGC GGTGCCTCTC GCTCGTTCCG GACCCCGTCA AGGACGCTAT
GCTGGGCTGG TGCCCGCAGT CCTGGTTTAT GTGATTTATA GCAACATGCT GGGAATAGCC
CGTAACTGGG TAGAGCATGA AGTAATTCCT GCCTCCCTCG GGTTATGGTG GATTCATGGT
CTAGTACTAT TAGTGGTGTT GATATCACTT TGGCCCCGGC CTTTGTGGAT GGCTTTACAC
CAAGCGCGCC GGCTTTTTGC CTGGGTGAGG CCGCAAAAAA TCTCCGCTCA ACGGCCCGCG
GCCTAA
 
Protein sequence
MFKLLIVDRY ILKELSLNAT AITLVLLLIF GGIRFIRFLS QATEGKVPGE AILALSGYEA 
IGALVLLLPL ASFLAVLLAL GRMGADNEVI ALFACGVSRG HLLRVVLTFG LALAIGVGGI
SLYLGPAASA EGYRLKQQAL LAAETSGLVA GNFKEAQHGQ RVFYAESLTE DGLGMKNVFI
QVWEPTQKTL LRAARGHLQT DEATGDKYLI LEDGYRYELM GEEVGVRIFS FERHGILVKK
GGAQEFRIRH QTLPTLTLWE MGAPKDIAEV QWRISMPIIT LLLVMLAVPL ARSGPRQGRY
AGLVPAVLVY VIYSNMLGIA RNWVEHEVIP ASLGLWWIHG LVLLVVLISL WPRPLWMALH
QARRLFAWVR PQKISAQRPA A