Gene Noc_1885 details

Gene Information

• Locus tag: Noc_1885
• ID: 3705459
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosococcus oceani ATCC 19707
• Kingdom: Bacteria
• Replicon accession: NC_007484
• Strand: +
• Start bp: 2148772
• End bp: 2150802
• Gene Length: 2031 bp
• Protein Length: 676 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637738364
• Product: hypothetical protein
• Protein accession: YP_343881
• Protein GI: 77165356

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGGCC CGCCTATCCC TACTCCAACG GCCCCCGAGG CCGTTGAAGC CATCGCCCAG 
AGCCGGGGCG GACAGCCGGC ACCCGGCGCC GGCAAGCCCG CCGGACCCGA ACCTGGAGAA 
GGTCAACGCT ACCGGATAAG CGCGCGCATC GACCGGGCCG AGTACACCCG GTTGCATGAG 
CGAACACCGG GAGAGCCCCT TTACCGGCCC CTTCGAATTT ACGCCCTGAA CCCGGCCGTG 
TCGCGCCTTG ACGGCGGCAT CGCCGCAACC AAAATCCAGT ATGAGCCCCT GGCGCCGGGA 
CCAAAAGGCT CGATTCTGGA AGTCGATTCC CAGGATGCCG AGGGCCGCAC CTACCCCAAG 
GCCAATCTTG AGGACCCCCT GGTGCTGCTG GAGGGGGGCT ACACCCCCTC CCTCTCTTCG 
CCCTGCTTCC ACCAGCAAAT GGTCTATGCG GTGGCGATGA TGACCTACAA CCACTTCAAA 
GTGGCCCTCG GGCGCAATGT GGCCTGGTCA TTCGCGCCCC GCGATCCGGC ATCGGGAAAC 
AACCGGCTGC TGCTACGTCC CCACGGGGCG CGGGAGGCTA ACGCCTGGTA CGATCGAACC 
CGGGGTGAAA TCGTCTTTGG CTACTTCAAG GCGAAAAACT CAACGCCGGT GGTGCGTCAA 
GACGAGGGGT ATGTATTCAC CTGCACTTCC CACGATATCA TCGTCCACGA AATGAGCCAT 
GCCTTGCTTG ATGGCCTCAG AGCCCACTTT CTCCATCCTA CCCAGGGCGA CGTGCTGGCC 
TTTCATGAAG CATTTGCCGA TCTTATCGCC GTGTTCCAGC ACTTCACCTT TGAAGACGTG 
GTGCGGGCCG AAGTCGCCTG CTCGCGGGGC AACCTTGAGA AGGCCGAGTT GCTCATTGAC 
ATCGCCCAGG AATTTGGCCG CAGCCTTGGC GAAGACGGAC GGGCGCTGAG AACTTTGGTG 
GATTTGGCGG AACATTGCCA TATTGGCGGC CACGATCACC AAATCAAATC CGGCGCCAAT 
CCTCTGACCT ATGACAATGC AGGGGTAGAA CCCCATGAAC GGGGCCGTGT GCTGGCCTGC 
GCCGTCTTTT CGGCATTTCT GACCCTTTAC CGGCGGCGAA CGCGCCGCTA TATCAAGCTG 
GCCACCCACG GCACGGGGGA GCTGCCCAAG GGCGATCTCT CCGATGGGTT GACCGATTTT 
CTGGTTGCCG AGGTGCGGCG GCTGGCCAAT CAGTTTCTGA CCATCTGCAT CCGCGCGATT 
GATTATTGCC CTCCTGTGGA CATGCGCTTT AGCGACTACC TGCGCGCCCT GATCACCGCC 
GACCAGGATG TGGCCCCCGA CGATGACTGG GCTTACCGGG AGGCCATTAT CCATGCCTTT 
GGCGAGCGGG GAATTTATGG CGAAGGCACG CCCACCATGA CCGAGGATGC GCTCACCTGG 
GGCGGGCCGC GTCTTCCCAT CGAGCCGGAG CCGGAGCTTA GCTTTGGACG CATGAAATTT 
GACAGCGATC CGGCCAAGCC TGCGGACGTT GCGGAGATGC GCCGGCAAGC GGGCGCCCTC 
GGGCGGCTCG CCACGCGCGT GGAATTGGCG GCGGAATTTG GGCTGGTCAG CCCCTCCAGC 
GCCGCTTTTG CCAGCGGCGA GTATGGCCTG CCCGTGGTGG AATCGGTGCG CTCGGTGCGG 
CGTGTGGGTC CGGACAAGCA GGTGGTTTTC GATATGGTGG CTGAAATCAT TCAGACCCGG 
CGCGTTAAAG ATCGCCAGGG ACGTCAATTC TCTTTCTATG GCGGCTCCAC CGTTATCCTG 
GGTCCCCGCG GCGGCGTCCG CTTTATCATC CGCAAACGGG TCGATCATGA GAAGCGGCTG 
GAAACCCAGC GCGAGTTTAT GCACAGCACC GACGAGGCGG CATTCTGGGA AGCGGAGGGA 
AACCGCGTTC GCCCGGCACG TGATCTTTCC CGGCGCCTGT GCGTTCGCTT CCGCGCCAGC 
CCTAACTCGG AAAGCGAGGC AAGCGACGTA CCGGCGCCGG GCCCTCGATA A 

 

Protein sequence

MKGPPIPTPT APEAVEAIAQ SRGGQPAPGA GKPAGPEPGE GQRYRISARI DRAEYTRLHE 
RTPGEPLYRP LRIYALNPAV SRLDGGIAAT KIQYEPLAPG PKGSILEVDS QDAEGRTYPK 
ANLEDPLVLL EGGYTPSLSS PCFHQQMVYA VAMMTYNHFK VALGRNVAWS FAPRDPASGN 
NRLLLRPHGA REANAWYDRT RGEIVFGYFK AKNSTPVVRQ DEGYVFTCTS HDIIVHEMSH 
ALLDGLRAHF LHPTQGDVLA FHEAFADLIA VFQHFTFEDV VRAEVACSRG NLEKAELLID 
IAQEFGRSLG EDGRALRTLV DLAEHCHIGG HDHQIKSGAN PLTYDNAGVE PHERGRVLAC 
AVFSAFLTLY RRRTRRYIKL ATHGTGELPK GDLSDGLTDF LVAEVRRLAN QFLTICIRAI 
DYCPPVDMRF SDYLRALITA DQDVAPDDDW AYREAIIHAF GERGIYGEGT PTMTEDALTW 
GGPRLPIEPE PELSFGRMKF DSDPAKPADV AEMRRQAGAL GRLATRVELA AEFGLVSPSS 
AAFASGEYGL PVVESVRSVR RVGPDKQVVF DMVAEIIQTR RVKDRQGRQF SFYGGSTVIL 
GPRGGVRFII RKRVDHEKRL ETQREFMHST DEAAFWEAEG NRVRPARDLS RRLCVRFRAS 
PNSESEASDV PAPGPR