Gene Noc_1873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1873 
Symbol 
ID3705447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2128809 
End bp2129249 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content55% 
IMG OID637738352 
Productphage tail region protein 
Protein accessionYP_343869 
Protein GI77165344 
COG category 
COG ID 
TIGRFAM ID[TIGR02241] conserved hypothetical phage tail region protein 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACCG GACAACGGAT AGACCCTTAT GGCAATTTTA ATTTTCTAGT TGAAATCGAC 
GGTATCACCC GCGCGGCCTT TCAGGAAGCA AGCGGCTTTG ACTCCAGCAT CGATATCACA
GAGCACCGGG AAGGCGGTAA TAACACCACC ATGGGAAAGC TTCCAGCCAT GACCAAGTAT
TCCAATATCA CACTGAAATG GGGATTAGCC GATGACACAG AGCTGTACGA CTGGCATCGG
CAATGGGTGA CCGGTGATCC GGCAGCCGCA CGTAAGAACG GGTCAGTAGT GCTTTTGGAC
CGACAGGGCC AGGAAAAGGT GCGTTGGAAT TTCTTCAGCG CTTGGCCGGC TAAGTGGACC
GGCCCCACCT TCAACGCCGA GGGCAATGAT GTCGCCATCG AGACGCTGGA GCTGGCCCAC
GAAGGACTTG AGCGCGCTTA A
 
Protein sequence
MATGQRIDPY GNFNFLVEID GITRAAFQEA SGFDSSIDIT EHREGGNNTT MGKLPAMTKY 
SNITLKWGLA DDTELYDWHR QWVTGDPAAA RKNGSVVLLD RQGQEKVRWN FFSAWPAKWT
GPTFNAEGND VAIETLELAH EGLERA