Gene Noc_1860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1860 
Symbol 
ID3705124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand- 
Start bp2113747 
End bp2114490 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content47% 
IMG OID637738339 
Producthypothetical protein 
Protein accessionYP_343856 
Protein GI77165331 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCAAAG ACTATTACCG GACCCAGCAC GGCGGCCTTG ATGCGCCTGC GCGTAATCAT 
TTTTTTCATG GGAAGTTACT TGATGTTTTT CATTTGGAGT TGGAGACAAA CTATTTTAAT 
CAAAAGCGTT GGCTTTTGAA CCGCCTGGTG ACAGGCTATG GTGTAGTGTG CGGATTGGAT 
GTCAAATTAA CCACGGACAA AAAGGCGATT ATTGTTCATC CTGGTGTTGC TGTAGACCGC 
TGCGGCAGAG AAATTGTTGT ACCTCAAGCT ACACAACCGG AAGCGCTGCC AGGTTTTCCA 
TCTTACCCCG ACGAAGAAGC TGAAGAACAG TCTAGATGCA AAGAAGAATA CGCTTATTAT 
GTAGGGCTAT GCTACAGGGA ATGTAAGAGC GATCCCGTGC CAGCCATGGT AAGCGACTGC 
GAGGTTGCCA TGTGTGCTCC AGGCTCTATC CGGGAAACGT ACGAGATCAA AATAAAAAAA 
GGGCATATTC CTGAAAAAAA AAGTACATTC CCAGACGTAA TTGAGGGACA GCACATTAGT 
TATTGCGCTA TCGTCGACCA GGTGACCAGA CCATGCCGGC CCCTGCCTAT GGATTGCTGT 
ATTCCTTTGG CAAATATCCT ATTGCGAGAT TCGGGTACAG AGTGGGAGCC GAAAATCGAT 
ATCTATATTC GCCCTATTGT CTATACTAAC CAACTGCTTT ACGAACTCAT TTTGTCACTG 
GTGCGCGAAG AAGAGCCTCA ATAA
 
Protein sequence
MGKDYYRTQH GGLDAPARNH FFHGKLLDVF HLELETNYFN QKRWLLNRLV TGYGVVCGLD 
VKLTTDKKAI IVHPGVAVDR CGREIVVPQA TQPEALPGFP SYPDEEAEEQ SRCKEEYAYY 
VGLCYRECKS DPVPAMVSDC EVAMCAPGSI RETYEIKIKK GHIPEKKSTF PDVIEGQHIS 
YCAIVDQVTR PCRPLPMDCC IPLANILLRD SGTEWEPKID IYIRPIVYTN QLLYELILSL 
VREEEPQ