Gene Noc_1813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1813 
Symbol 
ID3705253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2053782 
End bp2054606 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content35% 
IMG OID637738296 
Productaerobactin siderophore biosynthesis protein IucB 
Protein accessionYP_343813 
Protein GI77165288 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.419117 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATAGATA AAAAAAAATT AAGAGTTAAC GATATTCTTT TAGATAAGGA AAAAGAAGAA 
TTTTTAAAAA ATAAATTTAT ACCTGATGTT AAAGAAGCAG AAATAAAGCC AGGTGATAAA
AAAACAATAA TCAGCAGAAA CGAGTTTTTC CAAATTCCTC CTTATTGGCT AATGAATCCT
GAAAGAGGAC TTTACCCCGT AGTTTGGACA GAAACTAACA GGGTTTCTCA TCCAATAAGG
CATAATCCAG AAAGGGGAAC TCTGCTCTAC AAAAGGTTTG TCTACGAAAT AGATAAAACT
ATTTCTTTTC GGGTCATCGA TCCAAAAAAT GACATCGATA CATTTTCGAG ATGGCACAAT
CAGCCACGTA TCTCGGAATT TTGGGAATTA AAAGATACAA GGGAAAATCA TCTTCAGTAT
ATAGAAAAAA ATTTAAATGA CCCCCATATC ATTCCTGTCA TATTAGATAT TAATGATGAA
CCTACTGGTT ATTTTGAGCT TTATTGGGTT AAAGAGGATC GTTTAGGAGC CTATTACGAA
AGCGGTGATT TTGATAGAGG GTTCCATTTC CTGATTGGGG AAAAAAAATT TCTGGGATTA
AAAAATACAG GCGCTATGCT AAAAAGTGTT ATCCATTATC TTTTTCTTGA TGAGCCCAGA
ACTTTAAAGA TTATGGCTGA GCCGCGATCC GATAATAAAA AGGTGTTGAA ATACGTTGAT
TTTCTTCCTT TTTGGAAAAG AATTAAAGAA TTTGATTTTC CCCATAAAAG AGCGGTCCTC
CTAGAGTGTA CCCGGGAGAG GTTTTTTACA GGCGGCTACT TATGA
 
Protein sequence
MIDKKKLRVN DILLDKEKEE FLKNKFIPDV KEAEIKPGDK KTIISRNEFF QIPPYWLMNP 
ERGLYPVVWT ETNRVSHPIR HNPERGTLLY KRFVYEIDKT ISFRVIDPKN DIDTFSRWHN
QPRISEFWEL KDTRENHLQY IEKNLNDPHI IPVILDINDE PTGYFELYWV KEDRLGAYYE
SGDFDRGFHF LIGEKKFLGL KNTGAMLKSV IHYLFLDEPR TLKIMAEPRS DNKKVLKYVD
FLPFWKRIKE FDFPHKRAVL LECTRERFFT GGYL