| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1740 |
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| Symbol | |
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| ID | 3705001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 1953928 |
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| End bp | 1956048 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637738223 |
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| Product | glycogen debranching protein GlgX |
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| Protein accession | YP_343742 |
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| Protein GI | 77165217 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.152679 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAAC CTATGAAGTT ATGGCCGGGA GATCCTTACC CGTTGGGAGC GACCTGGGAT
GGTTCAGGGA CTAATTTTGC TCTTTTTTCA GAACATGCGA CGGCAGTAGA ACTTTGCCTA
TTCAATGGTC CGGAGGAGAT ACGGATTCGG CTTTCAGAAG CCTCCAATTT TTCTTGGCAT
GGCTACTTGC CAGGGGTGGG GCCAGGACAA CGCTATGGTT TTCGGGTTCA TGGTCCTTAT
GAGCCCCATG CTGGTCATCG CTTTAACCCA GCTAAATTAC TGTTTGATCC TTATGCTAAG
GCTATTGAGG GAACAGTCCA GTGGGACGAT GCCCTTTATG GCTATCAAGT TGGGCACCCC
GAGGCTGATC TTAGCAAGGA TGAGCGCGAT AGCGCCACAA TGCTGCCTAA ATGCGTGGTG
ATCGACCCCA GTTTTGATTG GGAAGGAGAT CGCCAGCTGC GAACTCCCTG GGATGAGACC
GTGATCTATG AGGTTCATGT TAAGGGTTTT ACCGCTCGCC ACCCAGAGGT TCCAGAACAT
CTGCGGGGGA CCTATAGTGG CTTGGTTTGC CCGGCGGTAA TTGAGTATCT CCATTCCCTG
GGGGTGACAG CGGTCGAACT CATGCCGGTT CATCACTGCG TTTCCGAGCG CCGTTTAGTC
GAACAGGGTT TGCGTAATTA TTGGGGTTAC GATTCTATAG GCTACTTTGC CCCGGATGCC
CGCTACGCTA GCTATTCTGA TGTAGGTCAG CATGTTAGCG AGTTTAAGGC TATGGTCAAG
AAGTTACATG CGGCGGGGAT CGAGGTGATT TTAGATGTGG TTTACAATCA TACCGCCGAG
GGGAACGAGT TAGGGCCTAC CCTTTGTTTC CGGGGAGTTG ATAATGTTAG TTATTACCGT
TTGCAGCCTG AGGACTCTCG CGCCTACATG GACTACACGG GCTGCGGCAA CACCCTCAAT
ATGATGCATC CCCGCACCCT GCAGCTGATT ATGGATAGCC TCCGCTATTG GGTACTGGAG
ATGCATGTGG ATGGATTTCG ATTTGACTTG GCGTCAGCGC TTGCAAGGGA GTTGCATGAA
GTGGATCGTC TGGGGGCCTT CTTCGACATT ATCCACCAAG ATCCGGTAAT TTCTCAGGTC
AAGTTGATTG CCGAGCCCTG GGATCTGGGC GAAGGAGGTT ATCAGGTCGG TAATTTTCCG
CCGGGTTGGG CTGAATGGAA TGGGAAATAC CGGGATTCCA TGCGTGATTA TTGGCGTGGG
GAGGAGCAGA CTTTGGGTGA ATTTGCCTAT CGGTTTACCG GTAGCTCGGA TCTTTATGAA
GCCAGTGGCC GCCGGCCTTT TGCAAGCGTC AATTTTATCA CTGCCCATGA TGGTTTTACC
CTCCATGATC TGGTTTCTTA TAACGAGAAG CATAACGAGG CCAATGGGGA GGATAACCAA
GATGGTGAAA GTCATAATCG CTCCTGGAAT TGCGGCGTTG AGGGGCCTAC CGATGACCCT
AAAATCAATA GGCTTCGAGC TCGTCAGAAG CGTAATTTCC TGACGACCCT ATTTTTGTCC
CAAGGTGTGC CCATGTTGCT GGGGGGTGAT GAAATAGGTC GAACCCAGCA AGGGAACAAT
AATGCTTATT GCCAGGATAA TGAGATCTCT TGGTTGGATT GGGCCCATAG AGATGAGACT
TTGCTGGAAT TTACCCAGCG GTTGATTCAT TTTAGAAAGG AACATCCCAT CTTTCGCCGC
CGGCACTGGT TTCAGGGCCG CCCTATTCAC GGCAGCAGTA TTTTTGATAT CAAGTGGTTT
ACGCCCGAAG GCCAGGAAAT GTCGGAGGAA GATTGGGGTG TGGGTTATGC TAAATCCTTG
GGAGTGTATT TAAATGGCGC GGGAATTATC GACACCGATA GGTATGGCGA GCCGGTGGTT
GACGATAGCT TTTACCTGCT CTTCAATGCT CACCATAAGC CGCTGACCTT TACTCTCCCA
AACGAAGAAT GGGGACAACA CTGGCTAAAA TCCCTGGATA CGGATGAGGC TCTTTCTGAG
GAAGATCATC GCCGATATGA GGCAGGCGGG CAAGTGACGG TTAAGGGGCG GGCATTGGTT
TTATTGCGTC ATATAAGCTA G
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| Protein sequence | MDKPMKLWPG DPYPLGATWD GSGTNFALFS EHATAVELCL FNGPEEIRIR LSEASNFSWH
GYLPGVGPGQ RYGFRVHGPY EPHAGHRFNP AKLLFDPYAK AIEGTVQWDD ALYGYQVGHP
EADLSKDERD SATMLPKCVV IDPSFDWEGD RQLRTPWDET VIYEVHVKGF TARHPEVPEH
LRGTYSGLVC PAVIEYLHSL GVTAVELMPV HHCVSERRLV EQGLRNYWGY DSIGYFAPDA
RYASYSDVGQ HVSEFKAMVK KLHAAGIEVI LDVVYNHTAE GNELGPTLCF RGVDNVSYYR
LQPEDSRAYM DYTGCGNTLN MMHPRTLQLI MDSLRYWVLE MHVDGFRFDL ASALARELHE
VDRLGAFFDI IHQDPVISQV KLIAEPWDLG EGGYQVGNFP PGWAEWNGKY RDSMRDYWRG
EEQTLGEFAY RFTGSSDLYE ASGRRPFASV NFITAHDGFT LHDLVSYNEK HNEANGEDNQ
DGESHNRSWN CGVEGPTDDP KINRLRARQK RNFLTTLFLS QGVPMLLGGD EIGRTQQGNN
NAYCQDNEIS WLDWAHRDET LLEFTQRLIH FRKEHPIFRR RHWFQGRPIH GSSIFDIKWF
TPEGQEMSEE DWGVGYAKSL GVYLNGAGII DTDRYGEPVV DDSFYLLFNA HHKPLTFTLP
NEEWGQHWLK SLDTDEALSE EDHRRYEAGG QVTVKGRALV LLRHIS
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