Gene Noc_1738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1738 
Symbol 
ID3704999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1949509 
End bp1951074 
Gene Length1566 bp 
Protein Length521 aa 
Translation table11 
GC content51% 
IMG OID637738221 
Productcobalamin B12-binding/radical SAM domain-containing Fe-S oxidoreductase 
Protein accessionYP_343740 
Protein GI77165215 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTTTC TCGCTGTTCA TCCAGGTCCG CTCATGTACA CTGAGGTTTT TTTACGGCTG 
GAGCCCCTAG GGCTCGAACT GGTCGCCGAG GCGGTTCGGC GGGCTGGGCA TGAGGTTCGA
ATTATTGATT TGCAGGTAGA AACTCATGCT GCCTATTTTA AGTTCATTGA ACATTGGCGC
CCTAATGCCC TGGCCTTCTC GTGCAATTTC TTGGCTAATG TGCCCGAGAT AGTTGATCTG
GCAAAAGAGA CCAAGCGGCG CCTGCCTCAA TGTTTTCTTT TTGTGGGGGG GCACAGCGCT
ACCTTTACCG CCCATGAGCT TCTGGAACAT GGTGACGGGG CGATTGACTG CGTGCTGCGC
GGGGAGGGGG AATCTTCCGT GGCGCGGCTC ATGGAGGTGA TCGAGGAGGA TAGGGAAGCC
ATCACGGAAG TGCCTGGCGT TGTGACTTTA GAGGGTGATG GCCCGCCTCC CGTTATGGTG
CCAAGCCTTG ATGATATCCG GCCTGCCCGG GATCTGGTGC GGCATCGGCG TAAGTACTTT
ATCGGCCATC TTGATCCTTG CGCTTCCATT GAATTTTCAC GGGGGTGTCC TTGGGACTGC
AATTTTTGCA GCGCTTGGAC CTTTTATGGC AGGAGTTACC GTACGATTAG TCCGGAGGTG
GCTGCTGAGG AGTTGGGGCG GATAAAGGAG TCGGGTATTT TTATTGTGGA TGATGTGGCC
TTTATCCAAT CCAAGCACGG ACTAGAGATT GGTGAGGCGA TTGCTCGCAA GGGGATCAAG
AAAAAATTCT ATCTTGAAAC GCGGGGCGAT GTACTCTTGC GTAACAAGGA AGTTTTTAAG
TTTTGGCGGG AATTGGGCGT GGAGTATATG TTTCTGGGCC TTGAGGCTAT CGATGAGGAA
GGATTAAAGA AATTCCGCAA GCGAGTCTCT CTCGACCAGA ACATGGAAGC TCTGGAATGT
GCCCGTTCCC TAGGCATTAC CGTTGCTATC AATATTATTG CGGACACGGA CTGGGATCGG
GAGCGATTTG AAGTCGTTCG TCAGTGGTGT CTTGAAGTCC CGGAGGTGGT GAACATTAGT
ATTAATACGC CTTATCCTGG CACGGAAATT TGGCATACTC AATCTGATCG CTTAACTACC
CGTGACTACC GTCTCTTTGA TATTCAACAC GCGGTGCTAC CGACTCGGCT TCCGTTGGAA
GAATTTTATA GTGAGCTTCT TAAAACCCAA CGGGTAATGA ACATGAAACA TATTTCCTGG
CGGACAATGG GGCATTTAGC GGGGCTGGTA AGCCAGCGTC TGATTAGGGG GCAGTTCAAT
TTTCTAAAAA TGCTTTGGCA ATTTAATAAA GTCTATAATT TAGAGCGTTT ACTGGCTGAT
CATGCGTATC CATCCGCCTA TAAAATGGCC TTGCCTTCCG CTCCAGGGAC GGCGGCTGAT
CGGAAAACGC TTTATGTTCA TAAGGTCCAC AAACGGCAGA AGCCAGTGCT TGATAAAGCT
ACCGCTCAGT TTGTTGAAGA AACGCGACTA TCAGCCTCGC GCTCGCAGCA AGGCAGCGCT
TTGTAA
 
Protein sequence
MRFLAVHPGP LMYTEVFLRL EPLGLELVAE AVRRAGHEVR IIDLQVETHA AYFKFIEHWR 
PNALAFSCNF LANVPEIVDL AKETKRRLPQ CFLFVGGHSA TFTAHELLEH GDGAIDCVLR
GEGESSVARL MEVIEEDREA ITEVPGVVTL EGDGPPPVMV PSLDDIRPAR DLVRHRRKYF
IGHLDPCASI EFSRGCPWDC NFCSAWTFYG RSYRTISPEV AAEELGRIKE SGIFIVDDVA
FIQSKHGLEI GEAIARKGIK KKFYLETRGD VLLRNKEVFK FWRELGVEYM FLGLEAIDEE
GLKKFRKRVS LDQNMEALEC ARSLGITVAI NIIADTDWDR ERFEVVRQWC LEVPEVVNIS
INTPYPGTEI WHTQSDRLTT RDYRLFDIQH AVLPTRLPLE EFYSELLKTQ RVMNMKHISW
RTMGHLAGLV SQRLIRGQFN FLKMLWQFNK VYNLERLLAD HAYPSAYKMA LPSAPGTAAD
RKTLYVHKVH KRQKPVLDKA TAQFVEETRL SASRSQQGSA L