Gene Noc_1672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1672 
Symbol 
ID3705617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1864456 
End bp1864947 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content40% 
IMG OID637738149 
Productcolicin V production protein 
Protein accessionYP_343674 
Protein GI77165149 
COG category[R] General function prediction only 
COG ID[COG1286] Uncharacterized membrane protein, required for colicin V production 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATCTGGG TAGATTATAT AATTATTGGA ATTATTTTTC TATCGGGGCT TTTCAGTTTA 
GCAAGGGGAT TTTTCAAAGA GACTTTATCT TTAATAGCTT GGGTAATGGC TTTCTGGATC
GGCTTAAATT TCTCGCCTCA AACGGCTGAA TGGCTTGCTG ATTTAATCAT GGTTCCACCT
TCACTACGGT TAGCAATTGC TTTTCTTCTC CTCTTGCTAG CCACTTTGTT ATTGGCTGCG
ATCGTAAATT ATCTCATTGT CAAGTTGGTG CATACAACAG GGCTAACGGG TACAGATAGA
ATTTTTGGGC TTGCCTTCGG TATTGTACGC GGTGTAGCTA TTATAACAGT ATTGGTGATT
TTAGCAGGAA TGACCCCTAT GCCCCAGGAT CCATGGTGGC GAAATTCGCA ATTGCTTAAT
TATTTTCAAG GACTTGCTCT TTGGGTACGT AGCTTTATGC CTCCTGATAT TGCTGGACAT
ATCCAATTTT AA
 
Protein sequence
MIWVDYIIIG IIFLSGLFSL ARGFFKETLS LIAWVMAFWI GLNFSPQTAE WLADLIMVPP 
SLRLAIAFLL LLLATLLLAA IVNYLIVKLV HTTGLTGTDR IFGLAFGIVR GVAIITVLVI
LAGMTPMPQD PWWRNSQLLN YFQGLALWVR SFMPPDIAGH IQF