Gene Noc_1658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1658 
Symbol 
ID3705638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1852685 
End bp1853056 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content40% 
IMG OID637738135 
ProductType IV pilus assembly PilZ 
Protein accessionYP_343660 
Protein GI77165135 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3215] Tfp pilus assembly protein PilZ 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0211682 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCATAC CTAATCAGTC CAGTTCTTCT TTACCTCCTC GGCAAGGTAT ATTATCTTTG 
AGCATTAAAG ATATTAATGC TCTCTACCAT GCTTATATCC CTTTTACTAG AAATGGAGGC
TTATTTATCC CTACCAATAG AAATTATTGT ATAGGGGATG AAGTTTTTAT GCTGCTTACT
TTAATGGAAG AGGTAGAGAA GGTTCCCGTT GCGGGCAAGG TGGTTTGGAT TACTCCGAGA
GGAGCTCAGA GTAATCGCGC CGCAGGGATC GGTATTCAGT TTAATGATAT CAATGGTAGT
GCAGCTCGGA ATAAAATCGA GACTTATTTA GCAGGCATGC TTAAATCTGA AAAATCGACT
CATACGATGT AG
 
Protein sequence
MSIPNQSSSS LPPRQGILSL SIKDINALYH AYIPFTRNGG LFIPTNRNYC IGDEVFMLLT 
LMEEVEKVPV AGKVVWITPR GAQSNRAAGI GIQFNDINGS AARNKIETYL AGMLKSEKST
HTM